Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq15718 167 3e-36 seq20429 150 2e-31 seq1 141 1e-28 seq15374 138 1e-27 seq20873 127 2e-24 seq14874 125 8e-24 seq2891 125 8e-24 seq1558 123 3e-23 seq2224 118 1e-21 seq15540 104 3e-17 seq20862 102 9e-17 seq16418 100 3e-16 seq12667 82.4 9e-11 seq2113 82.4 9e-11 >seq15718 Length=2773767 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || ||||| || |||||||| ||||| ||||||| | Sbjct 1505090 ATGCAGATTTTTGTAAAAACCCTTACAGGGAAGACTATCACTCTCAAGGTTGAACCCTCG 1505031 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| | ||||| || || ||||| ||||| ||||||||||| || ||| Sbjct 1505030 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 1504971 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || ||||||||||| |||||||| || |||| | ||| | | ||||| || Sbjct 1504970 CAAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAAC 1504911 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| |||||||||||||| || ||| | ||||| ||||| Sbjct 1504910 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1504864 >seq20429 Length=9870158 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| ||||| || || |||||||| || || || ||||| ||| | | Sbjct 2401157 AATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 2401216 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | ||| | ||||| || || || ||||||||||| || ||||| || || Sbjct 2401217 CGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCA 2401276 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || |||||||| ||||| || || |||| || ||||| | ||||| || Sbjct 2401277 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 2401336 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || || | ||||| | ||||| Sbjct 2401337 CATCCAGAAGGAGTCCACCCTGCACCTGGTGCTCCGTCTCAGAGGTGG 2401384 >seq1 Length=29265399 Score = 141 bits (156), Expect = 1e-28 Identities = 169/228 (74%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 23782930 AATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 23782989 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | ||| |||| || || || ||||| ||||| || | ||| || ||||| Sbjct 23782990 CGACACCATCGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGGA-TCCCCCTGACCA 23783048 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| || || ||||| || ||||| | || |||| || || || | ||||| || Sbjct 23783049 GCAGCGGCTCATCTTTGCAGGCAAGCAGGTGGAAGATGGGCGCACTCTTTCTGACTACAA 23783108 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || || ||||| ||| |||| || | ||||| Sbjct 23783109 CATCCAGAAAGAGTCGACCCTGCATCTGGTCCTGCGCCTGAGGGGTGG 23783156 >seq15374 Length=4994092 Score = 138 bits (152), Expect = 1e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| || || |||||||| || || || ||||| ||| | | Sbjct 172683 AATGCAAATTTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 172742 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | ||| |||| || || || ||||| ||||| || || || || ||||| Sbjct 172743 CGACACCATCGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGGATCCCCCCTGACCA 172802 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| || || ||||| || ||||| || || |||| || || || | ||||| || Sbjct 172803 GCAGCGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACTCTTTCTGACTACAA 172862 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 |||| || || || || || || || ||| ||||||| Sbjct 172863 CATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCGTCT 172901 >seq20873 Length=9479699 Score = 127 bits (140), Expect = 2e-24 Identities = 158/214 (74%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 8324527 AATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 8324468 Query 27465 TGATAGCATTGCAAATTTGAA--GGCTAAAATTCAGGACAAGGAGGGAAT-TCCTCCAGA 27521 ||||| ||||| ||| |||| ||| || |||||||| || || || || || || || Sbjct 8324467 TGATACCATTGAGAATGTGAAGGGGCCAAGATTCAGGATAAAGAAGGCATCCCCCCCTGA 8324408 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 ||||||| | || || ||||| || ||||| || || |||| || || || | ||||| Sbjct 8324407 CCAGCAGTGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACTCTTTCTGACTA 8324348 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 | |||| || || | || || || || ||| Sbjct 8324347 CAGCATCCACAAAGAGTAGACCCTGCACCTGGTC 8324314 >seq14874 Length=8333406 Score = 125 bits (138), Expect = 8e-24 Identities = 148/200 (74%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAA 27492 || ||||| || ||||| |||||||| | |||| || |||| | ||||| || Sbjct 1094576 GGGAAGACCATCACTCTCGAGGTTGAACCCTCAGATACAATACAAAATGTAAAGGCCAAG 1094635 Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || ||||| ||||| ||||||||||| |||||||| | || |||||||||| |||||| Sbjct 1094636 ATCCAGGATAAGGAAGGAATTCCTCCTGACCAGCAAAGACTGGTTTTTGCTGGCAAGCAA 1094695 Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTA 27612 || || ||| ||||| | ||| |||| | |||||||| ||||||||||||| Sbjct 1094696 CTGGAAGATAGACGTACTTT----GACCATAACATTCAAAAGGAGACCACTCTTCATCTT 1094751 Query 27613 GTCTTGCGTCTTCGCGGTGG 27632 || ||| | |||| ||||| Sbjct 1094752 GTGTTGAGACTTCATGGTGG 1094771 >seq2891 Length=6317780 Score = 125 bits (138), Expect = 8e-24 Identities = 148/200 (74%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAA 27492 || ||||| || ||||| ||||||| | |||| || | |||| | |||||||| Sbjct 1420285 GGGAAGACCATCACTCTCAAGGTTGAACCCTTGGATATAATAGAAAATGTAAAGGCTAAG 1420344 Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || ||||| ||||| ||||||||||| || ||||| | |||||||||||||| |||||| Sbjct 1420345 ATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTAATTTTTGCTGGCAAGCAA 1420404 Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTA 27612 || || |||| |||| || |||| || | |||||||| | ||||||||| || Sbjct 1420405 CTGGAAGATGGATGTACTCT----GACTGCAACATTCAAAAGGAGTGCACTCTTCACCTT 1420460 Query 27613 GTCTTGCGTCTTCGCGGTGG 27632 || ||| | ||| | | ||| Sbjct 1420461 GTGTTGAGACTTTGTGTTGG 1420480 >seq1558 Length=6673444 Score = 123 bits (136), Expect = 3e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 2790476 AATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 2790535 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 | | ||| ||| ||||||| || || ||||| ||||| || || || || || || Sbjct 2790536 CAACACCATCAAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGATCA 2790595 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| || || ||||| | ||||| || || |||| || || || | ||||| || Sbjct 2790596 GCAGCGGCTCATCTTTGCATGCAAGCAGCTGGAAGATGGGCGCACTCTTTCTGACTACAA 2790655 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 |||| || || || || || || || ||| Sbjct 2790656 CATCCAGAAAGAGTCGACCCTGCACCTGGTC 2790686 >seq2224 Length=17281721 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || ||| |||| || | || ||||| ||| | || Sbjct 758092 ATGCAGATTTTCGTCAAGACCCTGACTGGCGAGACCATCGCCCTGGAGGTGGAGCCCAGT 758033 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| |||||| || || ||||| ||||| || | ||||| |||||| Sbjct 758032 GACACCATTGAGAATGAGAAGGCCAAGATCCAGGATAAGGAAGGGACCCCTCCTGACCAG 757973 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| |||||| | || || |||| | | || | ||||| || Sbjct 757972 CAGCGGCTCATCTTTGCAGGTAAGTAGCTGGAAGATGGGCACGCTCTTTCTGACTACAAC 757913 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 ||||||| || || || || || || ||| Sbjct 757912 ATCCAAAAAGAGTCAACCCTGCACCTGGTC 757883 >seq15540 Length=10794444 Score = 104 bits (114), Expect = 3e-17 Identities = 163/234 (70%), Gaps = 11/234 (5%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || | || | ||||| || ||||| || ||||| ||||||| | Sbjct 10655590 ATGCAGATTTTCATAAAATCCCTTACAGGGAAGACCATCACTCTCCAGGTTGAACCCTCG 10655531 Query 27466 GATAGCATT-------GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCC 27518 |||| || | |||| | ||||| || || ||||| | ||| |||||||| || Sbjct 10655530 GATACAATGTATCTGAGAAAATGTAAAGGCCAAGATCCAGGATAGGGAAGGAATTCCACC 10655471 Query 27519 AGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGA 27578 |||||||| | || ||||||||||| |||||||| || |||| | ||| | || Sbjct 10655470 TGACCAGCAAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACATACTTT----GA 10655415 Query 27579 CTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || | |||||||| ||||||||| |||| || ||| | || | ||||| Sbjct 10655414 CTGCAACATTCAAAAGGAGTCCACTCTTAATCTTGTGTTGAGACTCCATGGTGG 10655361 >seq20862 Length=464634 Score = 102 bits (112), Expect = 9e-17 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 27409 CAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGAT 27468 || || || || || || ||||| || ||||| || ||||| ||||||| | ||| Sbjct 291626 CAGATTTTCGTAAAAACCCTTACGGGGAAGACCATCACTCTCAAGGTTGAACCCTCGGAT 291685 Query 27469 AGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAG 27528 | | | |||| | ||||| || || ||||| ||||| ||||||||||| || ||||| Sbjct 291686 ACTACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAA 291745 Query 27529 CGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTC 27588 | || || |||||||| |||||||| || |||| | ||| | | ||||| || | Sbjct 291746 AGACTGATATTTGCTGGCAAGCAACTGGAAGATGGACATACTTCATCTGACTACAACATT 291805 Query 27589 CAAAAG 27594 |||||| Sbjct 291806 CAAAAG 291811 >seq16418 Length=1794168 Score = 100 bits (110), Expect = 3e-16 Identities = 118/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || || |||||||| || || |||||||| || | || Sbjct 1337913 ATGCAGAT-TTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAACCCAGT 1337971 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | || || ||||| || ||||||||||| | ||| || |||||| Sbjct 1337972 GACACCATCGAGAACGTCAAAGCCAAAATCCAAGACAAGGAGGGCA-TCCCCCCGACCAG 1338030 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562 | |||||| || ||||| || || | || ||||||| Sbjct 1338031 CCGCGTCTGATATTTGCAGGCAAACGGCTGGAGGATG 1338067 >seq12667 Length=7590463 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184 || ||||| || | |||||||||||||| || || ||| | ||||| || |||| Sbjct 2522768 ACTATTGTGAATTTGGCTCAGAACTTTGTGGGAAGTAACAACATTAACTTGCTTCAGCCT 2522709 Query 32185 TCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244 ||| |||||||| || ||||| |||||||| |||||||| ||| | ||||| || Sbjct 2522708 ATTGGTCAGTTTGGAACTCGGCTTCATGGTGGCAAAGATGCTGCAAGCCCTCGTTATATT 2522649 Query 32245 TTCAC 32249 ||||| Sbjct 2522648 TTCAC 2522644 >seq2113 Length=8555354 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184 |||||| |||| | |||||||| ||||| ||| ||||| || ||| | | |||| Sbjct 3737235 ACCATTATCAATTTGGCTCAGAATTTTGTGGGTAGCAATAATCTAAACCTCTTGCAGCCT 3737294 Query 32185 TCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244 ||| |||||||| ||| |||| |||||||||||| |||| || | || |||||| Sbjct 3737295 ATTGGTCAGTTTGGTACCAGGCTACATGGTGGCAAGGATTCTGCTAGTCCTCGATACATC 3737354 Query 32245 TTCAC 32249 ||||| Sbjct 3737355 TTCAC 3737359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570149722173680