Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq15196 107 3e-18 >seq15196 Length=3550818 Score = 107 bits (118), Expect = 3e-18 Identities = 191/275 (69%), Gaps = 4/275 (1%) Strand=Plus/Plus Query 14275 AGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGC 14334 ||||||| |||||||| || ||| | || |||||||| | || || || | ||| | Sbjct 811763 AGGACACCTACAGCCCGGATGAGTATCTCTGGGCCACTATCCAAAGGATC--CCGGAAGT 811820 Query 14335 CCGGGGGGATCCC-CGTTCA-CGTCAAGTACGACACCTCGGACATGTGGGCCAAGGTCAG 14392 || || || | | || | | ||||||||| || |||||| ||| | ||| Sbjct 811821 CCCTGGCTCTCTCTCCTTGAGCCATAAGTACGACTTGTCTGACATGCAGGCAGTTGCCAG 811880 Query 14393 GTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTG 14452 ||| ||||||||||| ||||| ||||| || ||| || || || | ||||| || || Sbjct 811881 GTTTGTCAAGTGGCAGTACTATGAGGGTGACATCTCTAAGGGTGCTCCCTACCCACCCTG 811940 Query 14453 CGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAA 14512 ||| ||| ||||||| | | | | ||||| || || | || ||| |||| ||| || Sbjct 811941 CGATGGCGTCCACGTGCGCTCGGTGTGCATTTTTGGAGCTGGAGACTTGAACTGGATGCT 812000 Query 14513 GAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACG 14547 | || | ||| |||| ||||| |||||||||| Sbjct 812001 GCGCAAGCACCACTTGTTTGCCAATAAGTTCGACG 812035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658553608464640