Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq15651 183 3e-41 >seq15651 Length=9404055 Score = 183 bits (202), Expect = 3e-41 Identities = 137/161 (85%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || |||||||||||||||||||| ||||| || || |||||||||||||| || | ||| Sbjct 6566945 TGCGCGATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGCCC 6567004 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||||||||| || || || ||||||||||||||||| || ||| | || ||||| ||| Sbjct 6567005 ATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACATAGAACTGG 6567064 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| ||| ||||| || |||||||||||||| ||||| Sbjct 6567065 CAGAGGGCGTGACACGGAGGCAGCGCCATCAGAGGAAGATC 6567105 Score = 183 bits (202), Expect = 3e-41 Identities = 137/161 (85%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| |||||||||||||| || ||||| ||| |||||||||| ||||| || | ||| Sbjct 6567105 GATCTTCCTCTGATGGCGCTGCCTCCGTGTCACGCCCTCTGCCAGTTCTATGTGGTGAAC 6567046 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||||||||| || || || |||||||||||||| | || ||||||||| Sbjct 6567045 GGTGAGCTGTCCTGCCAGCTGTACCAGCGGTCGGGAGACATGGGCCTGGGCGTGCCGTTC 6566986 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||||||||||||||| || Sbjct 6566985 AACATCGCCAGCTACGCCCTGCTCACGTACATGATCGCGCA 6566945 Score = 102 bits (112), Expect = 7e-17 Identities = 117/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || |||||||| || ||||||||||| || || || ||||||||||| |||| |||| Sbjct 6570642 TATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTC-CCCTTCTCC 6570700 Query 6959 CGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 | ||| ||| ||| | |||||||||||||| || || | ||||||||||| || Sbjct 6570701 TCTGGTGGAGAATCCCAGGCCATCCAGAAAGTCTCGGGATCCATTGGCGTCCCAGATTTT 6570760 Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052 || ||| ||| || || || || | ||| |||| Sbjct 6570761 GACTCCCTTGGAAGACAGTTCTTTAGCGTTTGTGG 6570795 Score = 102 bits (112), Expect = 7e-17 Identities = 117/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352 |||| ||| | || || || || ||| ||| || || ||||||||||| | || || | Sbjct 6570795 CCACAAACGCTAAAGAACTGTCTTCCAAGGGAGTCAAAATCTGGGACGCCAATGGATCCC 6570736 Query 34353 GAGACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTC 34411 ||||||||||||| | ||| ||| ||| | |||| |||| ||||||||||| || Sbjct 6570735 GAGACTTTCTGGATGGCCTGGGATTCTCCACCAGAGGAGAAGGG-GACTTGGGCCCAGTT 6570677 Query 34412 TACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || || ||||||||||| || |||||||| || || Sbjct 6570676 TATGGCTTCCAGTGGAGGCATTTTGGGGCAGAATA 6570642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448136107672080