Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq20429 145 5e-30 seq15374 129 4e-25 seq1558 129 4e-25 seq1 129 4e-25 seq15718 105 5e-18 seq20873 102 6e-17 seq2224 102 6e-17 seq16984 87.8 1e-12 seq16418 84.2 2e-11 seq2891 82.4 5e-11 >seq20429 Length=9870158 Score = 145 bits (160), Expect = 5e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | | ||||||||| || ||| |||||| ||||||||||| || Sbjct 2401388 CATGCCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 2401329 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || |||| | || |||||||||||||| |||||||||| | ||||||||| | Sbjct 2401328 AGACAGGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCGGG 2401269 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | || ||||| || ||||| ||| | | ||| | ||||||||| || | Sbjct 2401268 AGGGATGCCCTCCTTGTCTTGGATCTT-TGCCTTGACATTCTCGATGGTGTCGCTGGGCT 2401210 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| | || || ||||| ||||| ||||||||||| ||||| ||||| Sbjct 2401209 CGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2401158 >seq15374 Length=4994092 Score = 129 bits (142), Expect = 4e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||| || ||||||||||| || | || |||| | || ||| Sbjct 172892 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCTTCC 172833 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | |||||||| || | || | |||||||| ||| Sbjct 172832 AGCTGCTTGCCTGCAAAGATGAGCCGCTGCTGGTCAGGGGGGATCCCTTCCTTATCCTGG 172773 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | ||| | ||||||||| || |||||||||| || || ||||| Sbjct 172772 ATCTTG-GCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTT 172714 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||| || |||||||| Sbjct 172713 GCCAGTCAGGGTCTTCACAAAAATTTGCAT 172684 >seq1558 Length=6673444 Score = 129 bits (142), Expect = 4e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||| || ||||||||||| || | || |||| | || ||| Sbjct 2790685 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCTTCC 2790626 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| | |||||||| | ||||||||||| | || | |||||||| ||| Sbjct 2790625 AGCTGCTTGCATGCAAAGATGAGCCGCTGCTGATCAGGGGGGATGCCTTCCTTATCCTGG 2790566 Query 44249 ATCTTCTGCTTCAATGTTCCT-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| ||| | ||||||| | || |||||||||| || || ||||| Sbjct 2790565 ATCTTGGCCTTCACA-TTCTTGATGGTGTTGCTGGGCTCCACCTCCAGGGTGATGGTCTT 2790507 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||| ||||||||||| Sbjct 2790506 GCCGGTCAGGGTCTTCACAAAGATTTGCAT 2790477 >seq1 Length=29265399 Score = 129 bits (142), Expect = 4e-25 Identities = 170/232 (73%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || ||||| || || || ||| || ||||||||||| || Sbjct 23783160 CATACCACCCCTCAGGCGCAGGACCAGATGCAGGGTCGACTCTTTCTGGATGTTGTAGTC 23783101 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || |||| | || |||| |||||| || |||||||| | |||||||| || | Sbjct 23783100 AGAAAGAGTGCGCCCATCTTCCACCTGCTTGCCTGCAAAGATGAGCCGCTGCTGGTCAGG 23783041 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| ||||| |||| | ||| | ||||||||| || | Sbjct 23783040 GGGATC-CCTTCCTTATCCTGGATCTTG-GCTTTCACATTCTCGATGGTGTCGCTGGGCT 23782983 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct 23782982 CCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATTTGCAT 23782931 >seq15718 Length=2773767 Score = 105 bits (116), Expect = 5e-18 Identities = 160/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG--CGAGT-TGG 44176 ||||||||||| || ||||| ||| ||||||||| |||||||| || | ||| || Sbjct 1504873 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGT 1504932 Query 44177 CGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCT 44236 | | || ||||| ||||| || ||||| |||| | |||||||| | ||| | ||| Sbjct 1504933 C---CATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCT 1504989 Query 44237 TCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296 ||||| ||| ||||| ||| | || |||| || || | || ||| |||| | Sbjct 1504990 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGA 1505049 Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || ||||| || || ||||| || || || || |||||| || Sbjct 1505050 GTGATAGTCTTCCCTGTAAGGGTTTTTACAAAAATCTGCATGTTG 1505094 >seq20873 Length=9479699 Score = 102 bits (112), Expect = 6e-17 Identities = 151/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||| || |||||| |||| || | || |||| | || ||| Sbjct 8324315 ACCAGGTGCAGGGTCTACTCTTTGTGGATGCTGTAGTCAGAAAGAGTGCGCCCATCTTCC 8324374 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC-ACACCTTCCTTTTCCGT 44247 |||||||| || |||||||| | | |||||| || | || | ||||| || ||| Sbjct 8324375 AGCTGCTTGCCTGCAAAGATGAGCCACTGCTGGTCAGGGGGGGATGCCTTCTTTATCCTG 8324434 Query 44248 TATCTT--CTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| | ||||| | | ||||| || || |||||||||| || || ||| Sbjct 8324435 AATCTTGGCCCCTTCACATTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTC 8324494 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||||||||| ||||||||||| Sbjct 8324495 TTGCCGGTCAGGGTCTTCACAAAGATTTGCAT 8324526 >seq2224 Length=17281721 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||| |||||||||||||| || | || | || | || ||| Sbjct 757884 ACCAGGTGCAGGGTTGACTCTTTTTGGATGTTGTAGTCAGAAAGAGCGTGCCCATCTTCC 757943 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||| ||| || |||||||| | |||||||| || | ||| |||||||| ||| Sbjct 757944 AGCTACTTACCTGCAAAGATGAGCCGCTGCTGGTCAGGAGGGGTCCCTTCCTTATCCTGG 758003 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| |||| | | |||||||| || |||||||||| | || |||| Sbjct 758004 ATCTTGGCCTTCTCATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGCGATGGTCTCG 758063 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| ||||| || ||||| Sbjct 758064 CCAGTCAGGGTCTTGACGAAAATCTGCAT 758092 >seq16984 Length=22061292 Score = 87.8 bits (96), Expect = 1e-12 Identities = 153/217 (71%), Gaps = 7/217 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | | ||||||||| || ||| ||||| |||||||||| || Sbjct 20914093 CATCCCACCTCTGAGACAGAGCACCAGGTGCAGGGTGGACTCCT---GGATGTTGTAGTC 20914037 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || |||| | || ||||||||||||||| |||||||||| ||||||||| | Sbjct 20914036 AGTCAGGGTGCGCCCATCTTCCAGCTGCTTCCCGACAAAGATCAACTTCTGCTGATC-GG 20913978 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| | | ||||| ||| | | ||| | |||||||| || | Sbjct 20913977 GGGGATGCCCTCCTTGTTTG-GATCTT-TGCCTTGACATTCTCAGTGGTGTCGCTGGGCT 20913920 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTT 44322 ||||| | || || ||||| || ||||||| || Sbjct 20913919 TGACCTCAAGGGTGATGGTCTTGCCGATGAGGGTGTT 20913883 >seq16418 Length=1794168 Score = 84.2 bits (92), Expect = 2e-11 Identities = 164/234 (70%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || |||| ||| | | |||| |||| | ||| ||| || | |||||||| ||| Sbjct 1338140 ATACCGCCTCACAGACAAAGCACCGGGTGCACGGTGGACTCTTTCCGAATGTTGTAGTCG 1338081 Query 44168 GC--GAGT-TGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | |||| |||| | || |||||| | || || ||||| |||| |||| |||| || Sbjct 1338080 GAAAGAGTGTGGC---CATCCTCCAGCCGTTTGCCTGCAAATATCAGACGCGGCTGGTCG 1338024 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGA 44283 | || | || ||||| || || || |||| | |||| | |||||||| || Sbjct 1338023 GGGGG-ATGCCCTCCTTGTCTTGGATTTTG-GCTTTGACGTTCTCGATGGTGTCACTGGG 1337966 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| | || || ||||| ||||| ||||||||||| || || ||||| Sbjct 1337965 TTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC-AAAATCTGCAT 1337913 >seq2891 Length=6317780 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| |||||||| |||| ||||||||| |||||| | || |||| | Sbjct 1420471 AGTCTCAACACAAGGTGAAGAGTGCACTCCTTTTGAATGTTGCAGTC--AGAGT--ACAT 1420416 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| || ||||| || | | |||||||| | ||| | |||||| Sbjct 1420415 CCATCTTCCAGTTGCTTGCCAGCAAAAATTAGTCTTTGCTGATCAGGAGGAATTCCTTCC 1420356 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || |||| | || || ||| |||| | || Sbjct 1420355 TTATCCTGGATCTTAGCCTTTACATTTTCTATTATATCCAAGGGTTCAACCTTGAGAGTG 1420296 Query 44300 ATCGTCTTTCCCG 44312 || ||||| |||| Sbjct 1420295 ATGGTCTTCCCCG 1420283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359891512774563