Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23]
22,539 sequences; 2,798,152,141 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq14430 188 1e-42
seq21317 127 3e-24
>seq14430
Length=2197182
Score = 188 bits (208), Expect = 1e-42
Identities = 179/229 (78%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315
|||||||||| |||||||||| ||||||||| || || ||||| || |||||||||||
Sbjct 1559805 GTCTGGAACAACTGCTCGTCACCCCATTCTGGGTGCTCCTGTTTAAGCACATCGCACACT 1559746
Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375
| ||| ||||||| |||||||| |||||||||||||| || ||||| ||||| |||||
Sbjct 1559745 CGGTTATGTTCCCGCAGCCAGATTGTGGCGTACATCATCAGGCCAGGCACCAGACCAAAG 1559686
Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435
|||| || || ||||| | |||| || ||| || || | || || |||||||| | |
Sbjct 1559685 ACCTCCTGCCCCACAGCAAACCGCAGGTGTTCAGGGACGTGAGGGGGGTAGATCATCTCC 1559626
Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATCT 9484
||||| ||||| || | ||| || |||| ||| || ||||| ||||
Sbjct 1559625 ACCTGAGTATCTTTCACTGTGGGAGGGTACACTTCTCCATCAATGATCT 1559577
Score = 131 bits (144), Expect = 2e-25
Identities = 150/202 (74%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708
|||||||||||| ||||||||||| ||||| || || |||||| ||| ||| | ||
Sbjct 1558636 TCTTACCCCATGGCCCAGTCCTTTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 1558577
Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768
|||||| || || || || ||| |||| || |||||||| | || ||||||||||||||
Sbjct 1558576 AAACTGATGGGTAAAGTGCTGGGCAAAGAATGCAAACATCATATTTGTGCCCTGGGGATC 1558517
Query 9769 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGCTT 9828
|| |||| | |||| |||||| |||||||||||| | | | ||| || ||||
Sbjct 1558516 AGGGATGAACTTTCTCCTTAGAAGAAATTTTTCCACAACCTCTTTTGAATCAGGAAGCTC 1558457
Query 9829 TGTTTTACCTGGTGAACGAGAA 9850
| || |||| || |||||
Sbjct 1558456 CTTCTTCCCTGAAAAATGAGAA 1558435
Score = 125 bits (138), Expect = 1e-23
Identities = 213/309 (69%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 8278 ATCGGGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTG 8337
||| ||||| ||||| || || ||||| ||||| || || | |||| ||||||||
Sbjct 1561496 ATCTGGAACGTTGAACGAAGCAAAGGGACAGCCCTTCACATTATTGCAGATGAGAGACTG 1561437
Query 8338 AATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCA 8397
||| | || | |||| ||| || || || ||||| || || ||||| ||||||||
Sbjct 1561436 AATTGAGGCAGTGTTGATGATTTTAAAACCTACTTCTCCACCAAAAGTGCTTGGCTTCCA 1561377
Query 8398 GTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAA 8457
||| | || || || || || |||| || ||||| | |||||| || || || |
Sbjct 1561376 GTAGTCAGGAGAACATATAGTATTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCAAC 1561317
Query 8458 CTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGT 8517
|| | ||| | ||||| |||||||| | ||||| ||||| || |||| | || |
Sbjct 1561316 TTCTACCATGGTTTCACCAAAGATGGCATCTGGACGAGGCTTCTCTACCAGCAGGCCAGG 1561257
Query 8518 GTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTT 8577
|| ||||||| || || | ||| || || || || | || || || ||||||||
Sbjct 1561256 ATATAGCTCCATGGCGTCAATGTCACCATAGAGTGCTTCCAACTCCGCGGCCATCTCCTT 1561197
Query 8578 TTCTCCTGT 8586
|| |||||
Sbjct 1561196 CTCACCTGT 1561188
Score = 100 bits (110), Expect = 4e-16
Identities = 188/273 (69%), Gaps = 5/273 (2%)
Strand=Plus/Minus
Query 8938 GGCACA---CTTACTCGGCCGGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATG 8994
|||||| ||||| | || || |||||||| ||||| ||||| || | ||||||||
Sbjct 1560414 GGCACAATGCTTACCCTCCCAGCAATTTGTTTGGTGAATGATTCAACGAACTGGGTAAGT 1560355
Query 8995 CCGTGAGTCATGAGTATGGAATTGTTGTAGACGAAGTTAACGTAGTCATACTTTGTTTTA 9054
||||| || ||||| || ||||| |||| || | |||| || | | |
Sbjct 1560354 CCGTGTTCCAGTAGTATAGAGTTGTTATAGAGAAACTGCTGATAGTTGTATTCCTGATCA 1560295
Query 9055 TCAATCTCAAATGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAA 9114
||||| | ||| || ||||||| || | ||||||||||| | | |||||||||| | |
Sbjct 1560294 TCAATTTGAAAGGCGTCCGGCAGAAGGGGGTGCCAGTGATAGAGCGTGTTAAACTCAGCA 1560235
Query 9115 AATATACGATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAG 9173
||||| || ||||||||||| | | ||| ||||| || || | |||| |||
Sbjct 1560234 GCGATACGGTTCTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAG 1560176
Query 9174 CTGAAAATGGTAGCCGCTGAGCTGCTGAACGTA 9206
| || || ||||| || | ||||| || ||
Sbjct 1560175 TTTGAAGTGATAGCCACTCAAGTGCTGTACATA 1560143
Score = 95.1 bits (104), Expect = 2e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967
|||||||| || || | |||||||| || || | || || ||||| || || |
Sbjct 1557744 TCACCTTTCACACCCATGGGAGTTGGGCAGTCATCAGCCACAGGAGGAAGGGCTCTGGTA 1557685
Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027
||||||||||| || ||||| |||||||||||| ||| |||||| | ||||| |
Sbjct 1557684 TAATAGGAGAGGTTAGAGAATGCTTCCCAGCTTTTGTAGCCGTAGTGTGTATTGTAAGTC 1557625
Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059
|| || || |||||||||| |||||| ||||
Sbjct 1557624 GGTGGACTATCAATCAAATGGGATCTGGCTGA 1557593
>seq21317
Length=8723464
Score = 127 bits (140), Expect = 3e-24
Identities = 169/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410
||||| || ||| |||| || || || || ||||| |||||||||||| | || ||
Sbjct 1656504 TTGACAATGTTGAAGCCCATCTCACCACCAAATGTGCTTGGCTTCCAGTACTCTGGAGAA 1656563
Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470
|||||| ||| | | ||| ||||||||||| || |||||||||| ||| | || |||
Sbjct 1656564 CAGATGGGATTCCCTAGGAGACCTTTGAGGGAAAAGGGAGCCCCCATCTCTATCATACTC 1656623
Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530
|| || ||||||| ||| || || |||||| | | | || | ||| | |||||
Sbjct 1656624 TCCCCAAAGATGGAGTTCGGTAGGCACTTTTCAAGAAGCAGCCCTGGGTAGAACTCCAAG 1656683
Query 8531 GCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585
|| |||| ||||||||| || || | || || || |||||| | |||||||
Sbjct 1656684 GCATCGATGTCTCCGTACAGCTCCTCCAACTCTGCTGCCATCTCCCTCTCTCCTG 1656738
Score = 127 bits (140), Expect = 3e-24
Identities = 169/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410
||||| || ||| |||| || || || || ||||| |||||||||||| | || ||
Sbjct 1662513 TTGACAATGTTGAAGCCCATCTCACCACCAAATGTGCTTGGCTTCCAGTACTCTGGAGAA 1662572
Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470
|||||| ||| | | ||| ||||||||||| || |||||||||| ||| | || |||
Sbjct 1662573 CAGATGGGATTCCCTAGGAGACCTTTGAGGGAAAAGGGAGCCCCCATCTCTATCATACTC 1662632
Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530
|| || ||||||| ||| || || |||||| | | | || | ||| | |||||
Sbjct 1662633 TCCCCAAAGATGGAGTTCGGTAGGCACTTTTCAAGAAGCAGCCCTGGGTAGAACTCCAAG 1662692
Query 8531 GCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585
|| |||| ||||||||| || || | || || || |||||| | |||||||
Sbjct 1662693 GCATCGATGTCTCCGTACAGCTCCTCCAACTCTGCTGCCATCTCCCTCTCTCCTG 1662747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716674828922560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |