Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_000929.1 Length=36717 Score E Sequences producing significant alignments: (Bits) Value seq20436 230 5e-56 >seq20436 Length=3738 Score = 230 bits (254), Expect = 5e-56 Identities = 376/537 (70%), Gaps = 5/537 (1%) Strand=Plus/Plus Query 36066 GTGAATAACTCTTACCTTCACCTGGGGGTATTCAGCGGACGCGATCTGGTTGGCGTTCTC 36125 ||||| ||||| || | |||||||| | || ||| ||||| ||||| ||||| | Sbjct 454 GTGAACAACTCCTATTTGCACCTGGGTATTTTTGACGGCCGCGAGCTGGTGGGCGTCATG 513 Query 36126 CAGTGGGGATATGCCCTTAACCCCAACT-CAGGTCGTCGTGTCGTGCTTGAAACGGATAA 36184 |||||||| || || | ||||| | | | || || || |||||| | || | || Sbjct 514 CAGTGGGGCTACGCGATGAACCCGAGCAGCGGGGCG-CGCGTCGTGACCGGCACCGGCAA 572 Query 36185 CCGGGGCTATATGGAGTTGAACCGCATGTGGCTACACGACGACATGCCCCGCAACTCTGA 36244 ||| | || |||||||| ||||| | ||| | || ||| ||||| |||||| | || Sbjct 573 CCGCGAATACATGGAGTTAAACCGGCTCTGGGTGCATGACCGGATGCCGCGCAACACCGA 632 Query 36245 ATCACGGGCCATCAGCTACGCGCTGAAAGTTATCAGATTACTGTATCCGTCAGTGGAGTG 36304 ||| || || |||||||| ||||||||| ||||| || || ||||| | ||||| || Sbjct 633 ATCGCGCGCAATCAGCTATGCGCTGAAAACTATCAAGTTGCTCTATCCCGCTGTGGATTG 692 Query 36305 GGTTCAGTCCTTTGCAGATGAACGCTGCGGACGCGCAGGCGTTGTGTATCAGGCGTCGAA 36364 ||| ||| | |||||||| || || ||||| || ||||| |||||||||||| || Sbjct 693 GGTGCAGACGTTTGCAGACGAGCGGTGCGGCCGGTTCGGCGTCGTGTATCAGGCGAGCAA 752 Query 36365 TTTTGATTTTATTGGCAGTCATGAAAGTACGTTCTACGAGCTGGATGGTGAGTGGTATCA 36424 ||| |||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| Sbjct 753 TTTCGATTACGTCGGCAGCCATCAAACGACGTTCTACGAGCTCGACGGAGAGTGGTATCA 812 Query 36425 CGAGATAACGATGA--ACGCGATTAAGCGAGG-TGGACAACGAGGCGTGTATTTACGGGC 36481 | |||| | |||| ||| | || ||| ||| || || | || | ||| Sbjct 813 CAAGATCGCCATGACGACGAAAGGGCGCAAGGCTGGCGCCCGTGGAAATTTCTTGCAGGC 872 Query 36482 TAATAAAGAGCGTGCCGTGGTACACAAATTTAATCAGTATCGCTACATCAGATTCCTGAA 36541 || | | || ||| | ||||| ||||||||||| | || ||| | || ||||| Sbjct 873 GAACGCACACCGCGCCACCGCACACACATTTAATCAGTTCAGGTATATCCGCTTTCTGAA 932 Query 36542 CAAACGAGCAAGGAAGCGGCTAAATACCAAACTATTCAAGGTTCAGCCATACCCTAA 36598 ||| || || | ||||||||| || || || |||| |||||||||| || Sbjct 933 CAAGCGGGCGCGCCGGCGGCTAAACACGAAGCTGTTCAGCCCGAAGCCATACCCGAA 989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117226406188336