Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq20436 147 6e-31 >seq20436 Length=3738 Score = 147 bits (162), Expect = 6e-31 Identities = 247/353 (70%), Gaps = 6/353 (2%) Strand=Plus/Plus Query 42954 TTGATTCTTGCTGGCGCGTCAGCCCCACAAAT--TCTCGACCAGTTTTTGGATGAGAAAG 43011 |||||| ||| ||||| || ||||| || | ||| |||||| ||| || |||| Sbjct 1380 TTGATTGCTGCCGGCGCATCGGCCCCGGTCATGATGTCG--CAGTTTCAGGAAGAAAAAG 1437 Query 43012 AGGGAAATAGCCTTACTGCTTACAAAGATGGCAGCGGCATCTGGACGATATGCCGTGGTG 43071 | ||| | |||| ||||| ||| | || || |||||||||||| || ||| | || | Sbjct 1438 AAGGACAGCGCCTGACTGCATACCAGGACGGAGTCGGCATCTGGACAATTTGCGGCGGCG 1497 Query 43072 CCACAATGGTTGATGGCAAGCCAGTAATGCAGGGCATGAAGTTGAC-GCAGGCCAAATGC 43130 || ||||| | ||| || || || |||| | |||| || | || ||| Sbjct 1498 TGACGATGGTCAACGGCCAGAAGGTTGTGAAGGGTCAGCGCCTGACCGCCGAGCAG-TGC 1556 Query 43131 AATCAGGTAAACGCCATCGAACGCAATAAGGCTCTTGCGTGGGTTGACCGCAATATCAAA 43190 || ||| | |||| || | || ||||| || | ||||| |||||||| |||| Sbjct 1557 AAGCAGATTGACGCAGCAGAGCAGAAAAAGGCGCTCGACTGGGTAGACCGCAACGTCAAG 1616 Query 43191 GTTCCTCTGACCGAACCGCAGAAAGCCGGTATCGCATCTTTCTGCCCGTACAACATAGGC 43250 || | |||||||||||||| |||| ||| ||||| || |||||||||| ||||| ||| Sbjct 1617 GTAACGCTGACCGAACCGCAAAAAGTCGGGATCGCCTCGTTCTGCCCGTGGAACATCGGC 1676 Query 43251 CCAGGCAAATGCTTCCCATCGACGTTCTATAAGCGTCTTAATGCTGGCGACCG 43303 || || ||||||||| | || || || || ||| || || || |||||||| Sbjct 1677 CCCGGAAAATGCTTCACCTCCACCTTTTACAAGAAGCTGAACGCCGGCGACCG 1729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148093459024208