Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq67205 239 2e-58 >seq67205 Length=1564 Score = 239 bits (264), Expect = 2e-58 Identities = 440/635 (69%), Gaps = 9/635 (1%) Strand=Plus/Minus Query 36915 TCAGCCGCTTCGCGGGCAATACGCTCCTCGCGCTCCTTCTGCTCGCGGGCGGCAGCTTCG 36974 || |||||||||||||| || ||||| || || |||||||| |||| |||| | || Sbjct 1542 TCGGCCGCTTCGCGGGCGATGCGCTCTTCACGTTCCTTCTGTGCGCGCTCGGCTTCAGCG 1483 Query 36975 GCGCGCAGTCGCTCCAGTTCGGCCTGCTCGGCTTCATACTTCTCGCGTGCAACGAGGGCT 37034 || ||||| ||| ||||||||||||||||||| || ||||||||||| || | |||||| Sbjct 1482 GCACGCAGGCGCGCCAGTTCGGCCTGCTCGGCGTCGTACTTCTCGCGCGCCGCCAGGGCT 1423 Query 37035 TCGCG-CAGCGCGGCCAGGGCCTTGCCCTTGGTACGGGCTGCCTCGGTTTCGAACTCTTC 37093 | ||| ||| | || |||| | ||||| ||| ||||||| ||| | || || Sbjct 1422 T-GCGTCAGGGAATCCTGGGCGCGGGCCTTGACGCGGTGCGCCTCGGCCTCGTATTCCTC 1364 Query 37094 CCAGTCCTCGCCAATCAAGAGGCCTTCCAGCCACTCAATGTTGGCTTTCAACTCGGTCGA 37153 |||| | | | | | || | | | | || ||| | || || ||||| || Sbjct 1363 CCAGGACGCATCCACGGCGCGGGCATTGACCTGTTCGATGGTCGCGCGCAGCTCGGCCGC 1304 Query 37154 ATCTAGGTCGCGGCATTC--CAG-GCGCATCTTGATCTGATCGATGCCGGCCTGGTGTTT 37210 ||| ||||||||| || | | ||||| || | ||||| || |||||| Sbjct 1303 ATCCAGGTCGCGGTTCTCGTCGGCGCGCAGGCGGAACCACTCGATACCCTGCTGGTGGCG 1244 Query 37211 GGCCTTGCGCATTTCCTCGCGCTGCT-CCCAATCCGTTAGGGGCTGGCGTACCTCTGCCT 37269 || |||| ||||||| || ||| |||| || || || ||| ||| |||||| | Sbjct 1243 CTGCTGGCGCGCTTCCTCG-GCGGCTTCCCACTCGGTGAGCGGCGCGCGCACCTCTTCG- 1186 Query 37270 GCCAGGA-GTCCAGCAGGTCACGCATGCGCTTACGCTCGGCGTCGACCTTCTTCGGAACT 37328 |||||| |||||| ||| ||||||||||| ||||||||||| | ||| || || Sbjct 1185 GCCAGGGCGTCCAGGGCGTCGCGCATGCGCTTGCGCTCGGCGTCAATGCGCTTGGGCACA 1126 Query 37329 TCCTTCAGCTCGGCGACCAGTTCCTTGCCCAGGTTGTCCAGCGCCGTCTTGGAGCGGGCT 37388 |||||||||||| ||||||||| |||||||||| ||| ||||| | |||||| | Sbjct 1125 TCCTTCAGCTCGTCGACCAGTTGCTTGCCCAGGGCGTCGAGCGCGGCCTTGGACTTGCGC 1066 Query 37389 ACCTTGTAGGCGATGGAGGCGACGGCCTCTCTGCCCTTGCGGGTAGTGACGTCTGGCACG 37448 |||||| | || | | ||| |||||| | |||||| || || | ||| |||||| Sbjct 1065 ACCTTGAACGCCAGGCTGGCAGTGGCCTCGCGGCCCTTCTTCGTCGTCATGTCCGGCACG 1006 Query 37449 AAGCCGTCGATCTCTTCGCGAATCTTGGCCAGGAACGGGTCAAGGCCATTGGCGGCCGAG 37508 ||| | ||| |||| |||||| | || | || || ||||| || ||| Sbjct 1005 TGGCCCGACACCTCGGCGCGGATCTTGTCGAGCCAGGGTTCCAGGCCGGAGGGCTTCGAA 946 Query 37509 TAGACCTGTAGTGCGGTTTCTTTGGCCGGCACTTC 37543 || |||| || |||||||| | || ||||| ||| Sbjct 945 TACACCTCCAGCGCGGTTTCCTGGGGCGGCAGTTC 911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180216543312192