Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_004333.2 Length=48247 Score E Sequences producing significant alignments: (Bits) Value seq26304 113 1e-20 >seq26304 Length=1289 Score = 113 bits (124), Expect = 1e-20 Identities = 370/557 (66%), Gaps = 26/557 (5%) Strand=Plus/Plus Query 12777 GTCGTACCAGACGCGAATCTCGCCTTCGCTCGATGCGTTCAAGCCGGTCGGCGTGAT-AC 12835 |||||| |||||||||||||||| ||| || ||||||| |||| |||||||||| | Sbjct 250 GTCGTAGAAGACGCGAATCTCGCCCTCGGCCGTGGCGTTCAGGCCGCTCGGCGTGATGCC 309 Query 12836 CGAGCAGCTTGATCAGCGGAATGTGCGAGACGGCGCTCATCTGCTCCTGGGCCTGGGCCT 12895 || | | ||| | |||||||||| | || ||| || ||||||| | | |||| || Sbjct 310 CGTGTA-CTTCACCAGCGGAATGCCTGGCACTACGCACAGCTGCTCCAGCGACTGGTTCT 368 Query 12896 GCAGTGCGTCGAGCCCGGATAGCGGCGTGTTGAACTGGAA---GAATTCTTCCGTC-GCC 12951 |||| ||||| || || || || ||| ||| || ||| |||||| | |||| || Sbjct 369 GCAGCGCGTCCAGTCCAGACAGAGGCACGTT---CTCGAACCCGAATTCCT-CGTCTTCC 424 Query 12952 TTGTCGA-GGAAAAGAATGTTCCGGTTGTCGCGATAGCGGTTGATCAGCTCG----GCGC 13006 |||| || || |||| | | ||| || ||||||| || ||| |||| Sbjct 425 TTGTTGACGGCGAAGACCCCGCGATTCGTC-CGTGTCCGGTTGAACACGTCGATGCGCGC 483 Query 13007 GCAT-CGACAAATCGACGTTCGCGCCGGGCATCAACGCCTGCGCGAGGTCCATCAAGATG 13065 | || || | ||| || |||| | | | || |||| || | || || | Sbjct 484 GAATACGTC--GTCGCCGGGATCGCCCGAAAGGATCGACTGC---AGATTGGTCTTGAAG 538 Query 13066 CCCGACACGCTGAACTGCTTGACGATGTCCGACACCGACTGGCGTGTGCGCAGCCAGTTG 13125 || ||| |||| | || | | | ||||| |||||| || |||||||||| Sbjct 539 ACCCCCACCGAGAACCCATCGATCAGATTGGCCACCGCCTGGCGCGTCTTCAGCCAGTTG 598 Query 13126 TCGATGTACGGCATCGCGAGCTGCGTCATGCTGATGCCGGCGAACGAATACGTCGGCTTG 13185 | || |||||| |||| ||||| |||| |||||| |||| || | |||||| Sbjct 599 TTGACGTACGGAATCGTCAGCTGGGTCAACGACATGCCGCCGAAGTTGTATGACGGCTTC 658 Query 13186 AGCATGTCGCCGACTGGGCGCGATACGATCGTGTGCAGGCGCGTCGCGTGGACTTCGGTG 13245 |||| ||| || |||||| ||||| | ||||||| ||| || || | | Sbjct 659 AGCAGGTCCGGCACCTCGCGCGACACGATATTCAGCAGGCGGCTCGAATGCACCTGGCGC 718 Query 13246 CCGATCATCCACCACGTCGAGGGTTTGTAGAAGT-CGTCCGCAACGGGGTTGATCG-AAT 13303 || | || |||| | || ||| |||||||||| || ||||| | |||||| ||| | Sbjct 719 CCCAGCACAAACCAGGACGTGGGCTTGTAGAAGTCCGGCCGCATC-GGGTTG-TCGCTGT 776 Query 13304 TGTAATTGTTCGGCGTC 13320 |||| || ||||||| Sbjct 777 TGTAGAGGTACGGCGTC 793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154076387467856