Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq20436 150 7e-32 >seq20436 Length=3738 Score = 150 bits (166), Expect = 7e-32 Identities = 207/287 (72%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 24577 AAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCGCTGACCGAACCCCAGAAAGCG 24636 |||||||| | ||||| || ||| |||| || ||||||||||||| || |||| Sbjct 1584 AAGGCGCTCGACTGGGTAGACCGCAACGTCAAGGTAACGCTGACCGAACCGCAAAAAGTC 1643 Query 24637 GGGATCGCGTCATTCTGTCCGTACAACATTGGTCCCGGTAAGTGTTTCCCGTCGACGTTT 24696 |||||||| || ||||| |||| ||||| || ||||| || || ||| | || || ||| Sbjct 1644 GGGATCGCCTCGTTCTGCCCGTGGAACATCGGCCCCGGAAAATGCTTCACCTCCACCTTT 1703 Query 24697 TAC-AGACGAATTAATGCAGGTGATCGAAAAGGTGCCTGCGAAGCGATTCGCTGGTGGAT 24755 ||| ||| | | || || || || || | || |||||| || || ||| | ||||| Sbjct 1704 TACAAGAAG-CTGAACGCCGGCGACCGTATTGGCGCCTGCCGAGAAATCCGCCGTTGGAT 1762 Query 24756 TAAGGACGGTGGCAGAGACTGCCGTATTCGTTCAAACAACTGTTACGGTCAGATATCCCG 24815 |||| |||| |||| ||||| || ||||| || ||||| ||||| ||||| || Sbjct 1763 ATTCGACGCTGGCCGAGATTGCCGCATCCGTTCGAATAACTGCTACGGGCAGATCGTACG 1822 Query 24816 TCGTGACCAGGAGAGCGCGCTGGCGTGCTGGGGAATCGACAGATAAG 24862 || || ||||| || ||||| ||||||||| | |||| || || Sbjct 1823 GCGCGATCAGGAAGCCGAACTGGCTTGCTGGGGATTGGACAAATGAG 1869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185023340523328