Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq20436 190 6e-44 >seq20436 Length=3738 Score = 190 bits (210), Expect = 6e-44 Identities = 352/514 (68%), Gaps = 2/514 (0%) Strand=Plus/Plus Query 42967 AAAAAGCAAATTGAGCGCGGCAATTCTGGCGCTGATCGCTACTGGAGCTTCTGCACCAGT 43026 ||| | |||| | ||||| || || |||||| |||| ||| | || || || || || || Sbjct 1349 AAAGACCAAACTTAGCGCCGCTATGCTGGCGTTGATTGCTGCCGGCGCATCGGCCCCGGT 1408 Query 43027 AATGATGTCTCAATTTCAGAAAGAAAAAGAAGGCACAA-GCCTGATTGCTTATCCTGACA 43085 |||||||| || |||||| ||||||||||||| ||| |||||| ||| || | ||| Sbjct 1409 CATGATGTCGCAGTTTCAGGAAGAAAAAGAAGG-ACAGCGCCTGACTGCATACCAGGACG 1467 Query 43086 ACGGCGGTGTCTGGACTATTTGCGGTGGTGTTACGCGCGTGGACGGAAAACCAGTCGTTA 43145 | ||| ||||||| |||||||| || || ||| || |||| | || || | Sbjct 1468 GAGTCGGCATCTGGACAATTTGCGGCGGCGTGACGATGGTCAACGGCCAGAAGGTTGTGA 1527 Query 43146 AGGGCATGAAGCTCACTCAAACACAATGCAACTCCATCGACAAGGCAGAGCAAGCCAAAG 43205 |||| | || || || ||||| || ||| |||||||| || | Sbjct 1528 AGGGTCAGCGCCTGACCGCCGAGCAGTGCAAGCAGATTGACGCAGCAGAGCAGAAAAAGG 1587 Query 43206 CGCTGTTATGGGTGCAGAAGAATGTCTACGTTCCTCTGACAGAGCCGCAAAAGGTCGGGA 43265 |||| ||||| | || ||| | || | ||||| || |||||||| ||||||| Sbjct 1588 CGCTCGACTGGGTAGACCGCAACGTCAAGGTAACGCTGACCGAACCGCAAAAAGTCGGGA 1647 Query 43266 TCGCTTCATTCTGCCCTTGGAACATTGGCCCGAGTAAATGTTTCACTTCTACGTTCTATC 43325 |||| || |||||||| |||||||| ||||| | ||||| ||||| || || || || Sbjct 1648 TCGCCTCGTTCTGCCCGTGGAACATCGGCCCCGGAAAATGCTTCACCTCCACCTTTTACA 1707 Query 43326 GAAAATTAAATTTAGGCGACCGCTTAGGCGCGTGCGCTGAAATTAAACGCTGGATACATG 43385 || | || |||||||| | ||||| ||| ||||| || |||||| | Sbjct 1708 AGAAGCTGAACGCCGGCGACCGTATTGGCGCCTGCCGAGAAATCCGCCGTTGGATATTCG 1767 Query 43386 ACGGCGGGAAAGATTGCCGTATTCGCTCCAATAACTGTTACGGGCAGATAGAGCGCCGTG 43445 ||| || ||||||||| || || || |||||||| ||||||||||| | || || | Sbjct 1768 ACGCTGGCCGAGATTGCCGCATCCGTTCGAATAACTGCTACGGGCAGATCGTACGGCGCG 1827 Query 43446 AACAAGAAAGCGAATTAACGTGTTGGGGGCTGGA 43479 | || ||| |||| | | || ||||| |||| Sbjct 1828 ATCAGGAAGCCGAACTGGCTTGCTGGGGATTGGA 1861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147978402707984