Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_005263.2 Length=48177 Score E Sequences producing significant alignments: (Bits) Value seq26304 104 7e-18 >seq26304 Length=1289 Score = 104 bits (114), Expect = 7e-18 Identities = 161/225 (72%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 13299 CACCGACTGGCGCGTGCGCAGCCAGTTGTCGATGTACGGCATCGCGAGCTGCGTCATGCT 13358 ||||| ||||||||| ||||||||||| || |||||| |||| ||||| |||| Sbjct 571 CACCGCCTGGCGCGTCTTCAGCCAGTTGTTGACGTACGGAATCGTCAGCTGGGTCAACGA 630 Query 13359 GATGCCGGCGAACGAATACGTCGGCTTGAGCATGTCGCCTACCGGCCGGGACACGATCGT 13418 |||||| |||| || | |||||| |||| ||| ||| || |||||||| | Sbjct 631 CATGCCGCCGAAGTTGTATGACGGCTTCAGCAGGTCCGGCACCTCGCGCGACACGATATT 690 Query 13419 GTGCAGGCGCGTCGCATGCACTTCGCTGCCGATCATCCACCACGTCGACGGTTTGTAGAA 13478 ||||||| ||| |||||| | || || | || |||| | || || |||||||| Sbjct 691 CAGCAGGCGGCTCGAATGCACCTGGCGCCCCAGCACAAACCAGGACGTGGGCTTGTAGAA 750 Query 13479 AT-CGTCCGCGACCGGGTTGATCG-AGTTGTAGTTGTTCGGCGTC 13521 | || |||| | ||||||| ||| ||||||| || ||||||| Sbjct 751 GTCCGGCCGC-ATCGGGTTG-TCGCTGTTGTAGAGGTACGGCGTC 793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153852666852976