Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq25071 132 2e-26 >seq25071 Length=22990 Score = 132 bits (146), Expect = 2e-26 Identities = 312/462 (68%), Gaps = 28/462 (6%) Strand=Plus/Plus Query 31166 GTCGCGGTCGGCCTCTTCCTGGTTGACGATCGTCGCGCCGATCCAGACGTTATCCGGCAG 31225 |||||||||| || ||||||| | || ||||||||||| |||||| || || Sbjct 2110 GTCGCGGTCGTATTCAGCCTGGTTCGCCATTGTCGCGCCGATAGCGACGTTGCGAGGTAG 2169 Query 31226 TCGGTCGATTCCGATCTCGCGTAGCATCG--CCGC-----GACGTTGCCGATGCGCTTCG 31278 | || | || | |||| | | |||| | | ||||||||| || ||||| | Sbjct 2170 ---GGCG-TGCCCACCTCGTGCGGGATCGGTCATCTTGAGGACGTTGCCAATCCGCTTTG 2225 Query 31279 TCAGCAACAACCAGTCGAGGTTTGGCGTGTCGGCGATCAGGCGGAACAGGTCCGCGCGCC 31338 | |||| || ||| | || || ||||| | |||||||| ||| || ||| ||||| Sbjct 2226 TGAGCAGCAGCCACACCAGATTCGGCGTCGCCTCGATCAGGTCGAAGAGATCCTTGCGCC 2285 Query 31339 ACGCCGGATCGACAGTGTTGTCGAAAACGTCGGCGAGCGACGCGCAGAACACGCGCTGTC 31398 | ||||| | || |||||||||||| ||||| || || |||||||||||| | | | Sbjct 2286 ATGCCGGGTTCACCTCGTTGTCGAAAACATCGGCCAGGGAGGCGCAGAACACGAACGGAC 2345 Query 31399 GGTGGCCGTGGATTGCATAGAACGCGCCGTCGCGGTTCCACTTCATGGGCTTGCGCCAGT 31458 ||| | ||| | | | ||| || | |||| ||| || | || | ||||| Sbjct 2346 GGTTGTCGT------CCTGG---GCGGCGGCCCGGTCCCATTTGAGCGGGTCTTTCCAGT 2396 Query 31459 TCGCGGGCG-ACGTGCGCCGCTGCGGCGCGCCGGGCCCCCAATTGACCGCCGTGCCGCCG 31517 | | | || ||| || | |||||||| || ||||| ||||| | | |||| Sbjct 2397 T-GTTGTCGCTCGTACGGACACGGGGCGCGCCTGGGCCCCAGCTGACC-CGCTTAAGCCG 2454 Query 31518 GAAAAGCGCGCATTGCGCGCCTCGGCATAACAGTGGTCGCATCCCGGACCGACCTTCTGG 31577 | | || | ||| || ||||| ||||| ||||| |||||| |||||| | Sbjct 2455 ----ATGGTCCA-TCCGCTGTTCTGCATAGCAGTGATCGCAAGCCGGACTGACCTTTGTG 2509 Query 31578 CAACCTTCCCACGGGTTGAACGTGTGGTCGCACCATTCGATT 31619 || || |||||| ||||||||||||||||||||||||||| Sbjct 2510 CATCCCATCCACGGATTGAACGTGTGGTCGCACCATTCGATT 2551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175227573600368