Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_005342.2 Length=48024 Score E Sequences producing significant alignments: (Bits) Value seq26304 118 3e-22 >seq26304 Length=1289 Score = 118 bits (130), Expect = 3e-22 Identities = 371/557 (67%), Gaps = 26/557 (5%) Strand=Plus/Plus Query 12751 GTCGTACCAGACGCGAATCTCGCCTTCGCTCGATGCGTTCAAGCCGGTCGGCGTGAT-AC 12809 |||||| |||||||||||||||| ||| || ||||||| |||| |||||||||| | Sbjct 250 GTCGTAGAAGACGCGAATCTCGCCCTCGGCCGTGGCGTTCAGGCCGCTCGGCGTGATGCC 309 Query 12810 CGAGCAGCTTGATCAGCGGAATGTGCGAGACGGCGCTCATCTGCTCCTGGGCCTGGGCCT 12869 || | | ||| | |||||||||| | || ||| || ||||||| | | |||| || Sbjct 310 CGTGTA-CTTCACCAGCGGAATGCCTGGCACTACGCACAGCTGCTCCAGCGACTGGTTCT 368 Query 12870 GCAGTGCGTCGAGCCCGGATAGCGGCGTGTTGAACTGGAA---GAATTCTTCCGTC-GCC 12925 |||| ||||| || || || || ||| ||| || ||| |||||| | |||| || Sbjct 369 GCAGCGCGTCCAGTCCAGACAGAGGCACGTT---CTCGAACCCGAATTCCT-CGTCTTCC 424 Query 12926 TTGTCGA-GGAAAAGAATGTTCCGGTTGTCGCGATAGCGGTTGATCAGCTCG----GCGC 12980 |||| || || |||| | | ||| || ||||||| || ||| |||| Sbjct 425 TTGTTGACGGCGAAGACCCCGCGATTCGTC-CGTGTCCGGTTGAACACGTCGATGCGCGC 483 Query 12981 GCAT-CGACAAATCGACGTTCGCGCCGGGCATCAACGCCTGCGCGAGGTCCATCAAGATG 13039 | || || | ||| || |||| | | | || |||| || | || || | Sbjct 484 GAATACGTC--GTCGCCGGGATCGCCCGAAAGGATCGACTGC---AGATTGGTCTTGAAG 538 Query 13040 CCCGACACGCTGAACTGCTTGACGATGTCCGACACCGACTGGCGTGTGCGCAGCCAGTTG 13099 || ||| |||| | || | | | ||||| |||||| || |||||||||| Sbjct 539 ACCCCCACCGAGAACCCATCGATCAGATTGGCCACCGCCTGGCGCGTCTTCAGCCAGTTG 598 Query 13100 TCGATGTACGGCATCGCGAGCTGCGTCATGCTGATGCCGGCGAACGAATACGTCGGCTTG 13159 | || |||||| |||| ||||| |||| |||||| |||| || | |||||| Sbjct 599 TTGACGTACGGAATCGTCAGCTGGGTCAACGACATGCCGCCGAAGTTGTATGACGGCTTC 658 Query 13160 AGCATGTCGCCGACCGGGCGCGATACGATCGTGTGCAGGCGCGTCGCGTGGACTTCGGTG 13219 |||| ||| ||| |||||| ||||| | ||||||| ||| || || | | Sbjct 659 AGCAGGTCCGGCACCTCGCGCGACACGATATTCAGCAGGCGGCTCGAATGCACCTGGCGC 718 Query 13220 CCGATCATCCACCACGTCGAGGGTTTGTAGAAGT-CGTCCGCAACGGGGTTGATCG-AAT 13277 || | || |||| | || ||| |||||||||| || ||||| | |||||| ||| | Sbjct 719 CCCAGCACAAACCAGGACGTGGGCTTGTAGAAGTCCGGCCGCATC-GGGTTG-TCGCTGT 776 Query 13278 TGTAATTGTTCGGCGTC 13294 |||| || ||||||| Sbjct 777 TGTAGAGGTACGGCGTC 793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153363677509024