Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq44442 176 2e-39 seq65054 98.7 4e-16 >seq44442 Length=1118 Score = 176 bits (194), Expect = 2e-39 Identities = 243/334 (73%), Gaps = 6/334 (2%) Strand=Plus/Plus Query 21905 GCGCTTGGCCGGCTGAAAACCGGCCAGATGAACAAGACCGAGCAGGCCTACGACCAGCAC 21964 || || ||||| ||||| ||||| || | ||||||||||| |||||| | | ||| | Sbjct 607 GCACTGGGCCGATTGAAAGCCGGCGAGCTCAACAAGACCGAAGCGGCCTATGCCGAGCGC 666 Query 21965 CTG-GCCTACCGAAAGC-TCGCAGGGGAGGTCGCCTGGTATCGGTTCGAGGGCATTAAGC 22022 ||| || | | | || ||| || | || |||| | |||||| ||| | |||| Sbjct 667 CTGCGCGCGCTGGAGGCATCG--GGCCATATCCTCTGGCACAAGTTCGAAGGCCTGAAGC 724 Query 22023 TGCGCCTGGCCGATAACACCTTCTACACCCCTGACTTCGCTGTGATGCTCACCGGCGGTG 22082 || | |||||||||||||| |||||||| || ||||| || ||| || ||| ||||| Sbjct 725 TGAGGCTGGCCGATAACACTTTCTACACTCCGGACTTTGCCGTGCTGGAGGCCGACGGTG 784 Query 22083 AGTTGGAACTG-CACGAGGTGAAGGGGTACTGGACCGACGATGCCCGGGTGAAGACCAAG 22141 ||| ||| ||||| |||||||| ||||| ||||||||| ||| |||| |||| Sbjct 785 TCATGG-CCTGCCACGAAGTGAAGGGCCACTGGCAGGACGATGCCAGGGCCAAGATCAAG 843 Query 22142 GTCGCCGCCGACCAGTATCCGCTCCGTATTATCGCGGTGTCGCCGAAGCCCAAAAAGGCT 22201 | ||||||| | |||||| |||| | ||||||||| | | || ||| || | Sbjct 844 ATTGCCGCCGCCATGTATCCATTCCGCTTCATCGCGGTGAAGGTAAGGCGCAAGCGGGAT 903 Query 22202 GGTGGCGGTTGGGCAGTGGAGGAGTTCTGATGGC 22235 ||||| || |||| |||||||||||||||||||| Sbjct 904 GGTGGTGGCTGGGAAGTGGAGGAGTTCTGATGGC 937 >seq65054 Length=1246 Score = 98.7 bits (108), Expect = 4e-16 Identities = 171/249 (69%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 64932 ATGAGCGAGAACACCATCAACCAGGCGATCAAGCGCCTTGGGTTCGATGGGCTGCTGACT 64991 || ||||||||||| ||||| | ||| | | || | || | | | | |||||||| Sbjct 953 ATCAGCGAGAACACTCTCAACTATGCGTTGACCCGGATGGGATACAAGGACGTGCTGACT 1012 Query 64992 GGTCATGGGTTGCGAGGGACTTTCTCCACTGCGCTGCATGAAATGGGCTACGACACGACG 65051 || || || | || || || |||||||||| || | ||| ||||||| | | Sbjct 1013 GGGCACGGCATTCGCGGAACGATCTCCACTGCCCTCAACGAAGTGGGCTATCTGAAAATT 1072 Query 65052 TTGATCGAGGGCCAGCTTTCCCATGCCGATCCCAACAAGACGCGGGCGGCATACAACCAT 65111 | | |||| | ||| | |||||| ||||||||| || | || || ||||||||| Sbjct 1073 TGGGTCGATGCGCAGTTGTCCCATAGCGATCCCAATCAGGTCAGCGCAGCTTACAACCAT 1132 Query 65112 GCCGCGCACGTTGAGCGTCGAAGGGCGATGATGCAAGACTGGGCTGATTATCTTGATCGG 65171 ||| | |||| |||| ||| | |||||||| |||||||||||| ||||||| Sbjct 1133 GCCATGTACGTGGAGCCTCGGCGCAAAATGATGCAGGACTGGGCTGATCGCCTTGATCTT 1192 Query 65172 TTGGAGCAG 65180 |||| ||| Sbjct 1193 CTGGAACAG 1201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208232304865312