Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_008464.1 Length=60238 Score E Sequences producing significant alignments: (Bits) Value seq20436 123 1e-23 >seq20436 Length=3738 Score = 123 bits (136), Expect = 1e-23 Identities = 326/494 (66%), Gaps = 8/494 (2%) Strand=Plus/Plus Query 5291 CTGGCGTTGATTGCCATCGGTGCGCCTGCGCCTGATAT--TCTCGACCAGTTTCTGGATG 5348 |||||||||||||| ||| || | || || | || | ||| ||||||| ||| | Sbjct 1374 CTGGCGTTGATTGCTGCCGGCGCATCGGCCCCGGTCATGATGTCG--CAGTTTCAGGAAG 1431 Query 5349 AAAAAGAGGGTAACCACACTACGGCATACCGCGATGGTTCCGGCATCTGGACCATCTGTC 5408 ||||||| || | | | || ||||||| || || |||||||||||| || || Sbjct 1432 AAAAAGAAGGACAGCGCCTGACTGCATACCAGGACGGAGTCGGCATCTGGACAATTTGCG 1491 Query 5409 GGGGGGCCACGATGGTGGATGGAAAACCCGTTTTTCCCGGTATGAAACTGTCGAAGGAAA 5468 | || | |||||||| | || | ||| | ||| | ||| | || Sbjct 1492 GCGGCGTGACGATGGTCAACGGCCAGAAGGTTGTGAAGGGTCAGCGCCTGACCGCCGAGC 1551 Query 5469 AATGCGACCAGGTCAACGCCATTGAGCGTGATAAGGCGCTGGCATGGGTGGAGAAAAACA 5528 | ||| | ||| | |||| |||| | |||||||| | ||||| || ||| Sbjct 1552 AGTGCAAGCAGATTGACGCAGCAGAGCAGAAAAAGGCGCTCGACTGGGTAGACCGCAACG 1611 Query 5529 TCAAAGTGCCATTGAGCGAACCCCAGAAAGCGGGGATCGCGTCATTCTGTCCGTACAACA 5588 |||| || | ||| |||||| || |||| |||||||| || ||||| |||| |||| Sbjct 1612 TCAAGGTAACGCTGACCGAACCGCAAAAAGTCGGGATCGCCTCGTTCTGCCCGTGGAACA 1671 Query 5589 TTGGTCCCGGTAAGTGTTTCCCGTCGACGTTTTATAAACGAA--TTAATGCAGGTGATCG 5646 | || ||||| || || ||| | || || ||||| || ||| | || || || || || Sbjct 1672 TCGGCCCCGGAAAATGCTTCACCTCCACCTTTTACAA--GAAGCTGAACGCCGGCGACCG 1729 Query 5647 CAGGGGAGCGTGTGAGGCGATTCGCTGGTGGATTAAGGACGGTGGCAGAGACTGCCGTAT 5706 | || || || | || ||| | ||||| |||| |||| |||| ||||| || Sbjct 1730 TATTGGCGCCTGCCGAGAAATCCGCCGTTGGATATTCGACGCTGGCCGAGATTGCCGCAT 1789 Query 5707 TCGTTCAAACAACTGCTACGGTCAGGTATCCCGTCGTGACCAGGAGAGCGCGCTGTCATG 5766 ||||| || ||||||||||| ||| | || || || ||||| || ||| | || Sbjct 1790 CCGTTCGAATAACTGCTACGGGCAGATCGTACGGCGCGATCAGGAAGCCGAACTGGCTTG 1849 Query 5767 CTGGGGTATCGACA 5780 |||||| | |||| Sbjct 1850 CTGGGGATTGGACA 1863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192399728796800