Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03]
105,032 sequences; 2,977,074,946 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq23525 114 1e-20
seq1776 114 1e-20
seq11136 93.3 4e-14
seq9750 91.5 1e-13
seq21443 86.0 5e-12
seq18922 86.0 5e-12
>seq23525
Length=221919
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 114152 AATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211
|| ||| ||||| |||||||| || | ||| | ||||| || |||||||| ||||| ||
Sbjct 219777 AACACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTC 219836
Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271
|| |||||| |||||| ||||| || ||||| |||| || | || || || ||
Sbjct 219837 AGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGG 219896
Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331
|||||| ||||| || || ||||| |||| | ||| | || || | || |||
Sbjct 219897 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTC 219956
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || || || || ||||| || |||||||||||
Sbjct 219957 AACCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCAT 220007
>seq1776
Length=1009680
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| |||||||| || | ||| | ||||| || |||||||| ||||| ||
Sbjct 76309 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGA 76250
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| |||||| |||||| ||||| || ||||| |||| || | || || || |||||
Sbjct 76249 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 76190
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| ||||| || || ||||| |||| | ||| | || || | || ||| ||
Sbjct 76189 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAC 76130
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | || || || || || ||||| || |||||||||||
Sbjct 76129 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 76082
>seq11136
Length=3384853
Score = 93.3 bits (102), Expect = 4e-14
Identities = 157/227 (69%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 114159 CCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATA 114218
||||| |||||||| || ||||| | ||||| ||||||||||| ||||| || || |
Sbjct 1795546 CCACGAAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGACAAA 1795605
Query 114219 GTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTG---GTCCGGAGGA 114275
||||| |||||| ||||| || ||||| |||| || | ||| || ||||||
Sbjct 1795606 GTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGACTAGGAGGAGGA 1795665
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| ||||| || | ||||| | || | ||| | ||||| | || ||| |
Sbjct 1795666 ATTCCTTCCTTAACCTGGATCTTGGCCTATACATTTTCTATTGTGTCTGAGGGTTCATCC 1795725
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | || || || || || ||| | || |||||||||||
Sbjct 1795726 TCGAGGGTGATGGTCTTCCCTGTAAGGGTTATCACGAAAATCTGCAT 1795772
>seq9750
Length=790633
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| |||| |||||||| | | ||| | |||| || |||||||||||| | ||
Sbjct 138608 ACCACCACAAAGTCTCAACAAAAGATGAAGAGTAGGCTCCTTTTGAATGTTGCAGTCAGA 138549
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| |||||| |||||| ||||| | ||||| |||| || | || || || |||||
Sbjct 138548 CAAAGTACGTCCATCTTCCAGTTGCTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 138489
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| ||||| || || ||||| |||| | ||| | | || | || ||| ||
Sbjct 138488 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGCCTTATCTGAGGGTTCAAC 138429
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | || || || | || ||||| ||||||||||||||
Sbjct 138428 CTCAAGGGTGATAGTCTTCCCCCTTAGGGTTTTCACAAAAATCTGCAT 138381
>seq21443
Length=656158
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||| || | ||| || |||||| || || || ||
Sbjct 30125 GTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 30184
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | ||| ||||| || ||||||||||| || || || || ||
Sbjct 30185 GCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTC 30244
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | ||| | |||||| ||| || || |||| ||| | || ||||||||||| ||
Sbjct 30245 ACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 30304
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 30305 TTCACGAAGATCTGCAT 30321
>seq18922
Length=4408181
Score = 86.0 bits (94), Expect = 5e-12
Identities = 156/226 (69%), Gaps = 3/226 (1%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||| | |||||||| || | ||| | || | || |||||||||||||| | |
Sbjct 376812 ACCACCAGGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGT--CA 376869
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| ||||| |||||| ||||| || ||||| |||| || | ||| | || |||||
Sbjct 376870 GACAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTCATCAGGAGG 376929
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| |||| || || ||||| |||| | ||| | || || ||| ||||||
Sbjct 376930 AATTCCTTGCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCATGGGTTCGAC 376989
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGC 114380
|| | ||| || || || || || || | ||||| |||||||||
Sbjct 376990 CTCGAGGGTGACAGTCTTCCCCGTAAG-GATTTTATGAAAATCTGC 377034
Score = 86.0 bits (94), Expect = 5e-12
Identities = 156/226 (69%), Gaps = 3/226 (1%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||| | |||||||| || | ||| | || | || |||||||||||||| | |
Sbjct 379816 ACCACCAGGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGT--CA 379873
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| ||||| |||||| ||||| || ||||| |||| || | ||| | || |||||
Sbjct 379874 GACAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTCATCAGGAGG 379933
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| |||| || || ||||| |||| | ||| | || || ||| ||||||
Sbjct 379934 AATTCCTTGCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCATGGGTTCGAC 379993
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGC 114380
|| | ||| || || || || || || | ||||| |||||||||
Sbjct 379994 CTCGAGGGTGACAGTCTTCCCCGTAAG-GATTTTATGAAAATCTGC 380038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419596595407584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |