Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_011373.1 Length=46872 Score E Sequences producing significant alignments: (Bits) Value seq67205 246 9e-61 >seq67205 Length=1564 Score = 246 bits (272), Expect = 9e-61 Identities = 457/660 (69%), Gaps = 12/660 (2%) Strand=Plus/Minus Query 34225 GCGCTCGGC---CTCGGCTGCTTCGCGGGCAATGCGTTCCTCGCGCTCTTTCTGCTCGCG 34281 ||||| ||| |||||| ||||||||||| ||||| || || || || ||||| |||| Sbjct 1555 GCGCTGGGCGCGCTCGGCCGCTTCGCGGGCGATGCGCTCTTCACGTTCCTTCTGTGCGCG 1496 Query 34282 AGCAGCAGCTTCGGCGCGCAGTCGCTCCAGCTCGGCCTGCTCGGCTTCATACTTCTCGCG 34341 | || | |||| ||||| ||| |||| |||||||||||||| || ||||||||||| Sbjct 1495 CTCGGCTTCAGCGGCACGCAGGCGCGCCAGTTCGGCCTGCTCGGCGTCGTACTTCTCGCG 1436 Query 34342 TGCAACGAGGGCTTCGCG-CAGCGCGGCCAGGGCCTTATCCTTGGTGCGGGCGGCCTCGG 34400 || | ||||||| ||| ||| | || |||| ||||| |||| ||||||| Sbjct 1435 CGCCGCCAGGGCTT-GCGTCAGGGAATCCTGGGCGCGGGCCTTGACGCGGTGCGCCTCGG 1377 Query 34401 TTTCGAACTCTTCCCAGTCTGCGCCAATGGATAGGCCTTCCAGCCATTCAATGTTGGCTT 34460 ||| | || |||||| || | | || || | | | | ||| ||| | || Sbjct 1376 CCTCGTATTCCTCCCAGGACGCATCCACGGCGCGGGCATTGACCTGTTCGATGGTCGCGC 1317 Query 34461 TCAACTCGGTCGAATCTAGGTCTCGGCATTC--CAG-GCGCAGGTTGATCTGATCGATGC 34517 || ||||| || ||| ||||| ||| || | | ||||||| || | ||||| | Sbjct 1316 GCAGCTCGGCCGCATCCAGGTCGCGGTTCTCGTCGGCGCGCAGGCGGAACCACTCGATAC 1257 Query 34518 CGGCCTGGTGTTTGGCCTTGCGCATTTCCTCGCGCTGCT-CCCACTCCGTTAGGGGCTGG 34576 | |||||| || |||| ||||||| || ||| ||||||| || || ||| | Sbjct 1256 CCTGCTGGTGGCGCTGCTGGCGCGCTTCCTCG-GCGGCTTCCCACTCGGTGAGCGGCGCG 1198 Query 34577 CGTACCTCTGCCTGCCAGGA-GTCCAGCAGGTCACGCATGCGCTTACGCTCGGCGTCGAC 34635 || |||||| | |||||| |||||| ||| ||||||||||| ||||||||||| | Sbjct 1197 CGCACCTCTTCG-GCCAGGGCGTCCAGGGCGTCGCGCATGCGCTTGCGCTCGGCGTCAAT 1139 Query 34636 CTTCTTCGGCACTTCCTTCAGCTCGGCGACCAGTTCCTTGCCTACGTTGTCCAGCGCCGT 34695 ||| ||||| |||||||||||| ||||||||| |||||| | | ||| ||||| | Sbjct 1138 GCGCTTGGGCACATCCTTCAGCTCGTCGACCAGTTGCTTGCCCAGGGCGTCGAGCGCGGC 1079 Query 34696 CTTGGAGCGGGCTACCTTGTAGGCGATGGAGGCGATGGCCTCTCTGCCCTTGCGGGTAGT 34755 |||||| | |||||| | || | | ||| ||||||| | |||||| || || Sbjct 1078 CTTGGACTTGCGCACCTTGAACGCCAGGCTGGCAGTGGCCTCGCGGCCCTTCTTCGTCGT 1019 Query 34756 GACGTCTGGCACGAAGCCGTCGATCTCTTCGCGAATCTTGGCCAGGAACGGGTCAAGGCC 34815 | ||| |||||| ||| | ||| |||| |||||| | || | || || ||||| Sbjct 1018 CATGTCCGGCACGTGGCCCGACACCTCGGCGCGGATCTTGTCGAGCCAGGGTTCCAGGCC 959 Query 34816 ATTGGCGGCCGAGTAGACTTGGAGGGCGGTTTCTTTGGCCGGCACTTCGACCAGTTGGGT 34875 || ||| || || | || |||||||| | || ||||| ||| | |||| ||| Sbjct 958 GGAGGGCTTCGAATACACCTCCAGCGCGGTTTCCTGGGGCGGCAGTTCAGCAAGTTCGGT 899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149681875389856