Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_013594.1 Length=37235 Score E Sequences producing significant alignments: (Bits) Value seq20436 250 6e-62 >seq20436 Length=3738 Score = 250 bits (276), Expect = 6e-62 Identities = 381/538 (71%), Gaps = 5/538 (1%) Strand=Plus/Plus Query 36104 GTGAATAACTCTTACCTCCACCTGGGAGTATTCAGCGGACGCGATCTGGTTGGCGTTCTC 36163 ||||| ||||| || | |||||||| | || ||| ||||| ||||| ||||| | Sbjct 454 GTGAACAACTCCTATTTGCACCTGGGTATTTTTGACGGCCGCGAGCTGGTGGGCGTCATG 513 Query 36164 CAGTGGGGATATGCCCTTAACCCCAACT-CAGGTCGTCGTGTCGTGCTTGAAACGGATAA 36222 |||||||| || || | ||||| | | | || || || |||||| | || | || Sbjct 514 CAGTGGGGCTACGCGATGAACCCGAGCAGCGGGGCG-CGCGTCGTGACCGGCACCGGCAA 572 Query 36223 CCGGGGCTATATGGAGTTGAACCGCATGTGGCTACACGACGACATGCCCCGCAACTCTGA 36282 ||| | || |||||||| ||||| | ||| | || ||| ||||| |||||| | || Sbjct 573 CCGCGAATACATGGAGTTAAACCGGCTCTGGGTGCATGACCGGATGCCGCGCAACACCGA 632 Query 36283 ATCACGGGCCATCAGTTATGCACTGAAAACCATAAGGTTACTGTATCCGTCAGTGGAGTG 36342 ||| || || ||||| ||||| |||||||| || | ||| || ||||| | ||||| || Sbjct 633 ATCGCGCGCAATCAGCTATGCGCTGAAAACTATCAAGTTGCTCTATCCCGCTGTGGATTG 692 Query 36343 GGTTCAGTCTTTTGCAGACGAACGCTGCGGACGTGCTGGCGTTGTGTATCAGGCGTCAAA 36402 ||| ||| | ||||||||||| || ||||| || ||||| |||||||||||| || Sbjct 693 GGTGCAGACGTTTGCAGACGAGCGGTGCGGCCGGTTCGGCGTCGTGTATCAGGCGAGCAA 752 Query 36403 TTTTGATTTTATTGGCAGCCATGAAAGCACGTTCTACGAGCTGGATGGTGAGTGGTATCA 36462 ||| |||| | ||||||||| ||| |||||||||||||| || || ||||||||||| Sbjct 753 TTTCGATTACGTCGGCAGCCATCAAACGACGTTCTACGAGCTCGACGGAGAGTGGTATCA 812 Query 36463 CGAGATAACGATGA--ACGCAATTAAGCGCGG-TGGACAACGAGGCATGTATTTACGGGC 36519 | |||| | |||| ||| || || || ||| || || | | || | ||| Sbjct 813 CAAGATCGCCATGACGACGAAAGGGCGCAAGGCTGGCGCCCGTGGAAATTTCTTGCAGGC 872 Query 36520 TAATAAAGAGCGTGCCGTGGTGCACAAATTTAATCAGTATCGCTACATCAGGTTCCTGAA 36579 || | | || ||| | |||| ||||||||||| | || ||| | || ||||| Sbjct 873 GAACGCACACCGCGCCACCGCACACACATTTAATCAGTTCAGGTATATCCGCTTTCTGAA 932 Query 36580 CAAGCGAGCAAGAAAGCGGCTAAATACCAAACTATTCAGGATTCAGCCATACCCAAAA 36637 |||||| || | ||||||||| || || || ||||| |||||||||| ||| Sbjct 933 CAAGCGGGCGCGCCGGCGGCTAAACACGAAGCTGTTCAGCCCGAAGCCATACCCGAAA 990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118881938738448