Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_016158.1 Length=49576 Score E Sequences producing significant alignments: (Bits) Value seq90861 165 3e-36 >seq90861 Length=1675 Score = 165 bits (182), Expect = 3e-36 Identities = 196/266 (74%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 43027 TACCGCAATAAAAAATGGCTAGCCGCAGTCGGCCAGATTGAGCAATGCGTCCTGTGCGGA 43086 ||||||| ||||||||| | || || ||||| || || || |||||||| |||| ||| Sbjct 1231 TACCGCAGCAAAAAATGGTTGGCGGCCGTCGGGCAAATCGAACAATGCGTGTTGTGTGGA 1172 Query 43087 GCGTGGGGCGTGCAGGTGGCGCACCGCAACGAGGGTAAAGGTATCGGAATGAAAACAGAC 43146 ||||| ||||| |||||||| |||||||| || ||||| || ||||||| ||| Sbjct 1171 AACTGGGGAACCCAGGTCGCGCACCGGAACGAGGGGAAGGGTATGGGGCTGAAAACTGAC 1112 Query 43147 GACTGCGCCACCGCTGCTATCTGCGTCACCTGTCATTCAGAGATTGATAACGGGAAGGGG 43206 |||||||||||||| || ||||||| || || | | ||| |||||||| || | Sbjct 1111 GACTGCGCCACCGCGGCGCTCTGCGTTTGTTGCCACACCGCGATCGATAACGGCAAAGAT 1052 Query 43207 CTGAGCCGTGACGAGCGCCGCCAGTTAATGGATCGAGCCATTGTCTTAACCGTTATCCAG 43266 || || || ||||| |||||| | ||||| || || || || | || |||| || Sbjct 1051 CTATCACGCGAAGAGCGGCGCCAGATGATGGACCGCGCGATCGTTCTGACGATTATTCAA 992 Query 43267 ATCGCCCGTCGTGGCCTAGTGGTGCC 43292 || ||||| || || || |||||||| Sbjct 991 ATAGCCCGCCGCGGGCTGGTGGTGCC 966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158323883141792