Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq93021 161 2e-34 >seq93021 Length=1234 Score = 161 bits (178), Expect = 2e-34 Identities = 274/391 (70%), Gaps = 17/391 (4%) Strand=Plus/Minus Query 22990 AAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGATCAGTGCCGGGCTTGGTGTGGTA 23049 |||||||| | || || ||||||| ||||| ||| | ||||| || ||||| Sbjct 702 AAGAACAGGAACTGGGCCACACCTTCGTTGGCGTAAATCCGGGCCGGCAACGGGGTGGTG 643 Query 23050 TTGGAAAACTCCAGAGTAAGCGAG-CCTTTCCATTCTGGTTCCAGCGGCGTGACGTTTAC 23108 |||||||||||||| || | || | |||| ||| || || |||||||| |||||||| || Sbjct 642 TTGGAAAACTCCAGCGTGA-CGTGACCTTCCCACTCCGGCTCCAGCGGGGTGACGTTGAC 584 Query 23109 GATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAGATAACTAATACGTCACGCGG 23168 ||||||||||| || || || || || || || || | || || ||||||||| Sbjct 583 AATGATGCCGCAGCGAGCGTAGGTGCTCTTACCCAGACACACCACCAACGTGTCACGCGG 524 Query 23169 AATGTTGAAGTGTTCCGGCGTGTTTGCCAGTGCGAAACTGTTCGGCGGAATGATCAGGCC 23228 |||| ||||| ||| ||| |||||| || || ||||| ||||| ||||| | | Sbjct 523 AATGCGGAAGTACTCCACCGTACGTGCCAGCGCAAAGCTGTTGGGCGGGATGAT--GCAC 466 Query 23229 TTGGCCGTTTGGAACGTGCTTCGTAACGA---AATTGTCTTCGGTGAAATTCTTTGGATC 23285 | || || | | ||| |||| | || || || ||| ||||| ||||| Sbjct 465 TCGGAACCTTCCA-----CATCG--ACGAAGCACTTCTCATC---GAAGTTCTTCGGATC 416 Query 23286 GACAACCGCGTTATTCAGGTTGGTGAAAACCTTGAATTCGTTACCGCAACGAATATCGTA 23345 ||| | || | || | ||||||||| |||||||| || || | || || | ||||| Sbjct 415 GACGATCGTGGAGTTGATGTTGGTGAAGACCTTGAACTCATTGGCACAGCGCACGTCGTA 356 Query 23346 GCCGTAGCTGGAAACACCGTAGGGAATGATC 23376 ||||||||||||| ||||||| | |||| Sbjct 355 GCCGTAGCTGGAATTGCCGTAGGAGACGATC 325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896415149362560