Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq3648 95.1 3e-15 >seq3648 Length=3343546 Score = 95.1 bits (104), Expect = 3e-15 Identities = 186/269 (69%), Gaps = 17/269 (6%) Strand=Plus/Minus Query 965 TGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGT 1024 ||| |||||||| ||| ||||||| |||| || || || || || | |||||||| Sbjct 2095177 TGGGTGTTATGGAAGAGTAGCTCCACGGTCAGGCTTGGCTGCAAAACACTTTATTGATGT 2095118 Query 1025 GGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTT 1084 || |||||||| || | | ||| | ||| || || ||||||||||| | ||||| || Sbjct 2095117 AGGAGCTGGTGTCATAGGTGAAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAACTT 2095058 Query 1085 TAGC---GATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAATTTGTGA 1141 | || || ||| ||| | | || |||||| | | ||| ||| | ||||| | Sbjct 2095057 TGGCAAAGAAAAG---TTTGAAGTCAAAAAGGGTGATTGAACTGCACAGCTCATTTG-CA 2095002 Query 1142 AAAGGCTGTTTTTCCATCCATTCAAATAGTGGA--TT----CCTTAGAGGATTCGGAAAG 1195 || || | ||||| ||||| |||||| || || | || || ||| | ||||| Sbjct 2095001 AACGGATTTTTTT--ATCCA--GAAATAGAAGAAGTTCAAGCTTTGGATGATACCGAAAG 2094946 Query 1196 GGGTTCTGCAGGATTTGGGTCTACCGGAA 1224 |||||| | ||| ||||| || || |||| Sbjct 2094945 GGGTTCAGGAGGTTTTGGTTCCACTGGAA 2094917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138508628680992