Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq54108 300 1e-76 >seq54108 Length=1175 Score = 300 bits (332), Expect = 1e-76 Identities = 783/1175 (67%), Gaps = 58/1175 (5%) Strand=Plus/Plus Query 68898 ACATTACGCTGTTCAGCCCACACGATGTGCCGGGCCTGTACGACGCGTTCTTTGTTGATC 68957 |||| ||||||||| || || || ||||| || |||||||| || ||||||| || | Sbjct 33 ACATCACGCTGTTCTCGCCTCATGACGTGCCCGGTCTGTACGAAGCCTTCTTTGCCGACC 92 Query 68958 AGGACAAGTTCGAAGAGCTGTACCTGAAGTACGAAGCCGACGAGAGCATCCGTAAGAAAT 69017 ||||| ||||||| |||||| || ||||||| || |||||| ||| Sbjct 93 AGGACGAGTTCGAGCGTCTGTACGAGATGTACGAACAAGATCCCGCCATCCGCAAGCGCA 152 Query 69018 CTATCCCGGCCGTCGACCTGTTCTCTACGCTGATGCAGGAGCGTGCCTCCACTGGTCGTG 69077 | || || || || |||||||| ||||||||| ||||||||| ||| || ||| Sbjct 153 GCCTGCCTGCTGTGGAGCTGTTCTCCCTGCTGATGCAAGAGCGTGCCAGCACCGGCCGTA 212 Query 69078 TTTATATTGCCAACGTCGACCACATGAACGATCACGGCGCATTCGTTCCGGAAATTGCAC 69137 | || ||| ||||| |||||| ||| ||| || ||||| | || || | Sbjct 213 TCTACATTCAGAACGTGGACCACTGCAACACGCACAGCCCATTCCAGGCCGACCGCGCTC 272 Query 69138 CGGTACACCAGTCCAATCTCTGTATGGAGATCACGCTACCGACCAAGCCACTGG-CGTTC 69196 | || | ||||||||| || || ||||| || | || || |||||||| || || || Sbjct 273 CCGTGCGCCAGTCCAACCTGTGCATGGAAATTGCCCTGCCCACCAAGCCTTTGAACGATC 332 Query 69197 ACTGA-CGATCCGAACGGGGAAATCGCGCTTTGCACCCTGTCTGCGTTCAACCTGGGCGC 69255 ||| |||||| | || ||||||||||| ||||| ||||| || ||||| ||||| || Sbjct 333 --TGAACGATCCCGAAGGTGAAATCGCGCTGTGCACGCTGTCGGCTTTCAATCTGGGTGC 390 Query 69256 GATCCGCA--CGCTGGACTCACTGAAAGACGTGGCGTTTTACGCTGTGG-CG-GCACTGG 69311 || | | | |||||| ||| | | |||| | || || || || |||| Sbjct 391 --TCTGGAGTCCCTGGACGAGCTGGACGGTCTGGC--TGAACTGATTGTTCGCGCTCTGG 446 Query 69312 ACTCTCTGCTCGACTATCAGGACTACCCTATGGCTGCTGCAGAAATCCCGGCTAAAGCTC 69371 | || |||| ||||||||||||||||| | |||||| | | | | || | Sbjct 447 ATGCTTTGCTGGACTATCAGGACTACCCGGTCAAGGCTGCACTGAACGCAACCAACAAGC 506 Query 69372 GTCGTAGTCTGGGTATTGGCGTGACCAACTTTGCTTACTATCTGGCGAAGAACGGCTTTA 69431 |||| ||||| ||||||| | ||||| |||||||| ||||| ||||||||| Sbjct 507 GTCGCTCCCTGGGCGTTGGCGTCATCAACTACGCTTACTACCTGGCCAAGAACGGCACCC 566 Query 69432 ACTACTCTGACGCTGCGGGCAACCAGCTGGTGCATGAG-------ACCTTCGAAGCCATT 69484 ||||| ||| | |||| | | ||| || ||| ||||| |||||||| Sbjct 567 GTTACTCCGACCC----GGCAGC--GTTGG-GCCTGACCCACCGTACCTTTGAAGCCATC 619 Query 69485 CAGTACTACCTGCTCGATGCGAGCTGCCG---ACTGGCCGAAGCGAAA--GGTGCATGTG 69539 |||||||||||| | || | ||| | | | | | || | ||| ||| | || | Sbjct 620 CAGTACTACCTGTT-GAAG---GCTTCGGTACAGTTGTCGC-GTGAATACGGTCCTTGCG 674 Query 69540 ACTGGTTCTCCCACACCAAATACGCACAGGGCCAGCTGCCAGTCGACCACTATCGCAA-A 69598 || || | | || | || || | || | |||||| |||| ||| ||| | Sbjct 675 ACGCCTTTGACGAAACAACCTATGCCAATGGACTGCTGCCTACCGACACCTA---CAAGA 731 Query 69599 ACGCTGGATACCAACCCGGAGACATCTTT----CGAGC---TGAAAATGCCGTGGGAAGA 69651 | | || | || || | ||| ||||| || | || ||||||| Sbjct 732 AAGATGTAGAC------GG-----TATTTGCAACGAGCCGCTGCACCTGGATTGGGAAGC 780 Query 69652 GCTGCGTGGCCGTATCCGTGAGCATGGTCTGCGTAACTCAACTCTGACCGCTCAAATGCC 69711 ||||||| ||| |||| |||||||| ||||| || |||||||| ||||| Sbjct 781 CCTGCGTGCTGACATCGTCAAGCACGGTCTGCGCAACTCCACCCTGACCGCCTTGATGCC 840 Query 69712 GTGTGAGACGTCCAGCCAGATCACCAACTCCACCAATGGTATTGAGCCGCCCCGCGGCCC 69771 | || || ||||||||||| |||| ||||||||||||||||||| || || |||| Sbjct 841 TTCGGAAACCTCCAGCCAGATTGCCAATGCCACCAATGGTATTGAGCCTCCGCGTGGCCT 900 Query 69772 GGTATCCGTGAAGTCTTCCAAAGACGGCATCGTGAAGATGGTCGTTCCAGACTTCGCTCA 69831 ||| ||||| ||| ||||| ||||||||| || ||| || || || || | | Sbjct 901 GGTGTCCGTCAAGCAGTCCAAGGACGGCATCTTGCGTCAGGTGGTGCCTGAATTTGAAAA 960 Query 69832 ACTGAAAGACCAGTACGAGTACCTGTGGGATATGCCGGATAACCGCGGCTATCTGACTAA 69891 | || || |||||||||| |||||| | ||||| | |||| || ||| |||| Sbjct 961 ATATAAGGATCAGTACGAGTTGCTGTGGCAAATGCCTGGTAACGACGACTACCTGAAGTT 1020 Query 69892 GGTGGCCATCATTCAGAAGTTCTTCGATCAGGCCATCTCTGCGAACACCAACTACGACCC 69951 ||| | | | || ||||||||| | || ||| | |||||||||||||||||||| ||||| Sbjct 1021 GGTTGGCGTGATGCAGAAGTTCGTTGACCAGTCGATCTCTGCGAACACCAACTATGACCC 1080 Query 69952 GACTCGCTTCCCTGGCGACAAGGTTCCAATGATGAAGCTGCTGGAAGATCTGCTGTTTGC 70011 || ||| || | || || |||| | | ||||| | || ||||| | || Sbjct 1081 ACAGCGGTTCGAGGGTGGTCGCGTACCGATGAAGCAACTGCTCAAGGACTTGCTGCTGGC 1140 Query 70012 GTATCAGCAAGGTGTGAAGACGCTTTATTACCACA 70046 || | | ||||||||||| | || ||||||| Sbjct 1141 CTACAAATACGGTGTGAAGACCTTGTACTACCACA 1175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330009021431520