Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq44442 109 2e-19 >seq44442 Length=1118 Score = 109 bits (120), Expect = 2e-19 Identities = 162/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 8427 GTTCGAGGGTATCAAGCTGCGGCTGGCTGACAACACGTTCTATACGCCCGATTTTGCTGT 8486 |||||| || | |||||| ||||||| || ||||| ||||| || || || ||||| || Sbjct 708 GTTCGAAGGCCTGAAGCTGAGGCTGGCCGATAACACTTTCTACACTCCGGACTTTGCCGT 767 Query 8487 GATGCTCGCCACCGGCGAGATGGAACTGC-ACGAAGTGAAAGGTTTCTGGACCGACGACG 8545 | || ||| ||| | |||| |||| |||||||||| || |||| ||||| | Sbjct 768 GCTGGAGGCCGACGGTGTCATGGC-CTGCCACGAAGTGAAGGGCCACTGGCAGGACGATG 826 Query 8546 CCAGGGTGAAAACCAAAGTCGCCGCAGATCAGTATCCGTTCCGAATCATCGGGGTAACGG 8605 |||||| || | ||| | ||||| | |||||| ||||| |||||| ||| | || Sbjct 827 CCAGGGCCAAGATCAAGATTGCCGCCGCCATGTATCCATTCCGCTTCATCGCGGTGAAGG 886 Query 8606 TTAAGCCAAAGAAAGCAGGTGGTGGCTGGAACATCGAAGAGTTCTGA 8652 | | || ||| | |||||||||||| | | || ||||||||| Sbjct 887 TAAGGCGCAAGCGGGATGGTGGTGGCTGGGAAGTGGAGGAGTTCTGA 933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143008609048864