Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq10346 138 2e-27 seq985 93.3 8e-14 >seq10346 Length=345594 Score = 138 bits (152), Expect = 2e-27 Identities = 397/598 (66%), Gaps = 22/598 (4%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 ||||| ||| ||||||| |||||||| || || |||||||||||| ||| | || Sbjct 269821 GATATCTGGCAGATGTATAAGAAGGCGGAAGCTTCCTTCTGGACCGCCGAGGAGGTGGAC 269762 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCT--ATCCAAAGACGAGCAGCATTTTCTCA 25591 ||| |||||||||| |||| | | || | || ||| ||| || ||||| | Sbjct 269761 CTGTCCAAGGACATTTGGCACTGGGAATCCCTGAAGCCCAAGGAGAG-AG-ATTTTATAT 269704 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | || ||| ||||||||||| |||||| ||||| || || || || ||| Sbjct 269703 CCCATGTTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGC 269644 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 |||| | | ||||| ||| || ||| ||||||| || ||||| || |||| Sbjct 269643 GATTTAGCCAAGAAGTTCAGATGACAGAAGCCCGCTGTTTCTGTGGCTTCCAAATTGCCA 269584 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTC--TGATGACG--TACATTACAGAC 25767 | || || | || ||||| ||||| || ||| | |||| ||||| | ||| Sbjct 269583 TAGAGAACATACATTCTGAAATGTAT----AGTTTCCTTATTGACACTTACATAAAAGAT 269528 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 | || || || || | |||||| || || || | |||||| |||| Sbjct 269527 CCCAAAGAAAGGGAATTTCTCCTCAATGCCATTGAAACGATGCCTTGTGTCAAGAAGAAG 269468 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGC-GCTACGTTTGGCGAGCGGCTGGT 25886 || |||||| || | ||||| | || || ||||| | ||| || || | || Sbjct 269467 GCAGATTGGGCCTTGCACTGGATTGGG-GACAAAGAAGCTACCTATGGTGAACGTGTTGT 269409 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 || ||||||||| | ||| |||||||||| |||| ||||| | || |||||||| Sbjct 269408 AGTCTTTGCTGCAGCGGAAGGCATCTTTTCT---GGTTATTTTGCATCGATATTCTGGCT 269352 Query 25947 CAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 |||| | | | |||| ||||| || || |||||||| || || || ||||| || | Sbjct 269351 CAAG-AAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGAGATG 269293 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC 26063 ||||| | ||| | |||||||| |||||| | | || ||| || | |||||||| Sbjct 269292 AGGGTTTACACTGTGATTTTGCTTGCCTGATGTTCA---AACACCTGGTACACAAACC 269238 >seq985 Length=6397689 Score = 93.3 bits (102), Expect = 8e-14 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 |||||||||||||| ||||| |||||||| || |||||| ||||| | || |||||| Sbjct 2227000 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGG 2227059 Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 |||||| | | | |||| ||||| || || |||||||| || || |||||||| || Sbjct 2227060 CTCAAG-AAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATCAGCAGAGA 2227118 Query 26004 CGAGG 26008 |||| Sbjct 2227119 TGAGG 2227123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927625319662080