Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_019527.1 Length=43551 Score E Sequences producing significant alignments: (Bits) Value seq26304 104 6e-18 >seq26304 Length=1289 Score = 104 bits (114), Expect = 6e-18 Identities = 438/682 (64%), Gaps = 36/682 (5%) Strand=Plus/Minus Query 22051 GCCGGACTTCTATAAGCCCAGCACATGGTGGGTGTTGGGGCGGGAGATGCACGCTTCG-- 22108 |||||||||||| ||||||| | |||| ||| ||||||| || |||| |||| Sbjct 757 GCCGGACTTCTACAAGCCCACGTCCTGGTTTGTGCTGGGGCGCCAGGTGCA---TTCGAG 701 Query 22109 -CGCCTGCTGACCATCATAACCCGCCCGCTGCCGGACATGCTCAAGCCTGCCTATAACTT 22167 |||||||||| ||| | | ||| | |||||||| |||| ||||| | || ||||| Sbjct 700 CCGCCTGCTGAATATCGTGTCGCGCGAGGTGCCGGACCTGCTGAAGCCGTCATACAACTT 641 Query 22168 CTCTGGGATCTCAATGTCCCAGCTGGCACAGCCCTACGTTGAGAACTGGTTGCGCACCCG 22227 | || || || || |||||||| | || ||||| | |||||| || || || Sbjct 640 CGGCGGCATGTCGTTGACCCAGCTGACGATTCCGTACGTCAACAACTGGCTGAAGACGCG 581 Query 22228 GCAATCCGTCAGTGACCTGGTGGACAAATTCTCCCGCACCTTCCTCAAGACCAACATGGC 22287 || | || | ||| | || ||||| || |||||||||| || Sbjct 580 CCAGGCGGTGGCCAATCTGATCGATGGGTTCTCGGTGGGGGTCTTCAAGACCAATCTG-- 523 Query 22288 CCAGGTGCTGAATGGTGGCGA---GGGTGGCGACGTCTTCGATCGCGTCGAAATGTACGT 22344 ||| | | | ||||| || | |||||| |||| ||| |||| ||| | Sbjct 522 -CAGTCGATCCTTTCGGGCGATCCCGGCGACGACGTATTCGCGCGCATCGACGTGT---T 467 Query 22345 CAAC---ATGCAGAGCAATCTCGG---CTTGGCGGTGATGGACTTCGATTCCGAGGACAT 22398 |||| | | || |||| ||| ||| || || | || || |||||| | Sbjct 466 CAACCGGACACGGACGAATCGCGGGGTCTTCGCCGTCA---ACAAGGAAGACGAGGAATT 410 Query 22399 CGTGCAGGTAAACACCCCGTTGTCAGGACTGGCTGACCTGCAAAGCCAGTCACAAGAGCA 22458 || | | ||| || |||| ||||||| | ||||| | |||||| | ||||| Sbjct 409 CGGGTTCGAGAACGTGCCTCTGTCTGGACTGGACGCGCTGCAGAACCAGTCGCTGGAGCA 350 Query 22459 CATGTGCTCGGTATCAAAGATCCCGGCAATCAAGCTCACTGGCATTAGTCCGTCCGGCCT 22518 ||||| || || || ||| | ||| ||| ||||| | ||| |||||| Sbjct 349 GCTGTGCGTAGTGCCAGGCATTCCGCTGGTGAAGTACACGGGCATCACGCCGAGCGGCCT 290 Query 22519 GAACGCGAGTAGCGAGGGGGAGATCCGCTCCTTCTATGACGATATCAGCTCGG----TGC 22574 |||||| | |||||| ||||| ||| |||||| ||||| || |||| | Sbjct 289 GAACGCCACGGCCGAGGGCGAGATTCGCGTCTTCTACGACGAAATGTTGTCGGCCCAGGA 230 Query 22575 AGCAGTCTTACTATTTCAGCCCGCTGGACACCA-TG-CTGAAAGTCATCCAGCTCAGCAA 22632 ||| || || | | ||||||| || || || ||| | || |||||||| ||| | Sbjct 229 AGCGGTGTTCC----GCGACCCGCTG--CAGCAGTGCCTGGAGGTGATCCAGCTGAGCGA 176 Query 22633 GTGGGGCGAGATTGACGACGCGATCACCTTCAAGTTCAAGTCGCTGTGGCAGACCAGCGC 22692 || |||||||| ||| || |||||||||| ||| | | ||||||| |||| Sbjct 175 GTTCGGCGAGATCGACCCCGACATCACCTTCAGCTTCGTGCCATTGTGGCAACTGAGCGA 116 Query 22693 GAAGGAGGAAAGCGAGATCCGC 22714 ||||||| | |||||| ||| Sbjct 115 GAAGGAGCAGGCCGAGATTCGC 94 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139067930218192