Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_019545.1 Length=47355 Score E Sequences producing significant alignments: (Bits) Value seq45019 349 1e-91 seq90861 280 4e-71 seq67108 250 8e-62 seq20436 122 3e-23 >seq45019 Length=1966 Score = 349 bits (386), Expect = 1e-91 Identities = 511/712 (72%), Gaps = 13/712 (2%) Strand=Plus/Minus Query 30551 GTTTTGCGGTATTCCAGCATGCCAAGTTCCAGCAACTCGGTAGACGCCTCAATGATGGCG 30610 ||||||||||| || || ||| ||||| ||| || | || ||||||| | ||||| Sbjct 1964 GTTTTGCGGTACTCAAGGCGGCCGAGTTCGGGCAGGTCAGCGGAGGCCTCAACGGTGGCG 1905 Query 30611 ACCCAGTGGTAGTTCTCGTCTTTGTTGACGAAAATCCAGAAAAACTGGTCCAGCGCCGCA 30670 | ||||||||||| ||| |||||||||||||| |||||||||||||| |||||||||||| Sbjct 1904 ATCCAGTGGTAGTGCTCATCTTTGTTGACGAAGATCCAGAAAAACTGATCCAGCGCCGCA 1845 Query 30671 GTTTCGCAGTACATGGCCGCGCTCAGGTGATAGTCCCGATCGATGATTTCACGGTGCAAC 30730 ||||| |||||| ||||||||||||| || || || |||||||||||||||||||| Sbjct 1844 ACATCGCAATACATGCCCGCGCTCAGGTGGTAATCGCGCTCGATGATTTCACGGTGCAAG 1785 Query 30731 TTCGCACGCAGGCCTTCCTGCTTGATGTTCCACATGCTGATAGTTTTCAGGTCGGCGCCA 30790 || |||||| | ||||||| || | |||||||| |||||||||||| ||| Sbjct 1784 CGGGCGCGCAGGGCGCTTTGCTTGACATTACCCATGCTGACGGTTTTCAGGTCGTAGCCG 1725 Query 30791 ATGCGCAGGCCGCCCATATCGATCTCAAGGTCAGGGCGTACCCGAACTTCCAACCCGGTT 30850 || |||||||| | || |||||||| || || ||||| || | ||| | |||||| Sbjct 1724 ATACGCAGGCCTACGGCCTCAATCTCAAGATCGGGACGTACGCGCAGTTCGAGGCCGGTT 1665 Query 30851 TCCTCATCAATCCCAAAATAGCTCACCTCGACAGCGCGGCTTGGGTGAGTCAGCAATTTG 30910 || ||||| || || |||||||| |||||||| ||||| ||||| |||||| | Sbjct 1664 TCTTCATCGATACCGAAATAGCTGACCTCGACCGCGCGTTGTGGGTTCTGCAGCAACTGC 1605 Query 30911 CCGGCGGTCGGGTGCTCCAGCAGGGCTTTCTGAATGTTCAGCGCGGTG-CTGAGCTGTTG 30969 ||| | | ||||| | |||||| |||||| | | | | ||| | | ||| Sbjct 1604 CCGACTGATGGGTGGGTGAACAGGGCGCGCTGAAT-TGCCGTGGCGTGTTTCATCTGCGC 1546 Query 30970 GCGGGTGACCAGCACTTTCCCT--TCGGTGTTCTCCCGCCACGCATCCAGCAATTCGTCG 31027 | |||| | || | || || || | | ||| || | || |||||| Sbjct 1545 CAGCGTGATC--GTCTGGCGCTGGTCATTGCTATTTTTCCATGCGCTGATCACCTCGTCG 1488 Query 31028 GCGAATACCGCTGCCGGGTTGACTGATTT--CACGGTCTGAATCAGATCGGCCTTCGTGC 31085 ||||||||||| | || | | ||| ||| | | || ||| | || ||| Sbjct 1487 GCGAATACCGCCGTTGGCAAAATCGTTTTGATACGCGCGG--CCATATCCTCTTTACTGC 1430 Query 31086 CAGAGATTTTCAACGGCGAC-GATTTTTGCGCTTCCTGAGCGACCAGGTCAGGGTTGATT 31144 | || |||||||| | || | |||| || | |||| | || || | ||| Sbjct 1429 CGCTGACAGGCAACGGCGCCGGAATCGCGCGC-TCTTTCTCGACAAACTCCGGATCGATG 1371 Query 31145 ATTGCCAGTTGCTCCAGCAGCGCGTCACGGCTGCCGCTGGTTTTAACCGGCGCGGGCAGG 31204 | |||| || |||||||| ||||| |||| |||| ||||||| | |||||| |||||| Sbjct 1370 GTCGCCAACTGTTCCAGCAGTGCGTCGCGGCCGCCGGTGGTTTTCAACGGCGCCGGCAGG 1311 Query 31205 GTGGCGTTGTACTCTTTGATGCAGGCTTTCATCGCCGTGGCTGT-ATGTTTG 31255 ||||||||||||||||||||||||||||||||||||||||| || || |||| Sbjct 1310 GTGGCGTTGTACTCTTTGATGCAGGCTTTCATCGCCGTGGCGGTGATTTTTG 1259 >seq90861 Length=1675 Score = 280 bits (310), Expect = 4e-71 Identities = 335/448 (75%), Gaps = 10/448 (2%) Strand=Plus/Minus Query 41834 ATCTTGGGTTTGAATACTGGGAACCCACCGGCGGCGCCATTTCTGCCAACGAGCGCAAAC 41893 |||| ||||| |||||||||||||||||||||||||| || || | ||||||||||||| Sbjct 1675 ATCTGGGGTTCGAATACTGGGAACCCACCGGCGGCGCTATCTCCACGAACGAGCGCAAAC 1616 Query 41894 TGGTAAACGGTTATGCAAAGTTTCTTGCTGCATATGGCGGGAATGAG--GGCGCATTACT 41951 |||| | ||| || || | || || ||| | | ||||| |||||| ||||| | || Sbjct 1615 TGGTTACCGGCTACGCCAGATTCCTGGCTACGTTCGGCGGCAATGAGCCGGCGCTT--CT 1558 Query 41952 GGATGCGGCTGAACAGTATCTGGAACAGATTGCAAACCGCCGGGTAACAAACGGGATTAG 42011 | ||||||| || |||||||| || | || || | || || | | | | || || Sbjct 1557 GAATGCGGCAGAGCAGTATCTCGAGCGCATCGCTGATCGGCGTG---CCGGCAGCATCAG 1501 Query 42012 CCTGTGTAAATCTTTCGATGCATACCGCGCATGGGTGACGGTTGAGGCTGGTCACTATGA 42071 | ||| ||||| || || || || ||||| ||||||||||| |||||||| |||||||| Sbjct 1500 CGCGTGCAAATCCTTTGACGCCTATCGCGCGTGGGTGACGGTCGAGGCTGGCCACTATGA 1441 Query 42072 CGCCATCCAGCTACCTGATGGCACCCTCCGCAAACATCCCCGCAGCATTGCTTTTTCCAG 42131 ||| ||||| || || || ||||| || |||||||||||||||||||| || || ||| Sbjct 1440 CGCGATCCAACTCCCCGACGGCACTCTACGCAAACATCCCCGCAGCATCGCGTTCGCCAA 1381 Query 42132 CATGGATGAGGTCGAATTTCAGCAGTTGTATAAATCCGCGCTTGATGTGCTCTGGCGGTG 42191 |||||| || || || || ||| ||||| | |||| || ||||| | ||||| || Sbjct 1380 CATGGACGAAACAGAGTTCCATCAGCTGTATCAGGCCGCACTCGATGTTTTATGGCGCTG 1321 Query 42192 GATTTTATCAC-GTACATTCCGTACTCAGTGCGAGGCCGAGAACGCCGCCGCCCAGCTAA 42250 ||| | ||| | || || | || ||||||||||||||||| || ||||| | Sbjct 1320 GATCCT-GCACAAGCCGTTTCGCTCCCATGAGGAGGCCGAGAACGCCGCGGCGCAGCTGA 1262 Query 42251 TGAGCTTTGCGGGGTGATGGCGATGAAA 42278 ||| |||||||||||| | |||||||| Sbjct 1261 TGAATTTTGCGGGGTGA-GACGATGAAA 1235 >seq67108 Length=4903 Score = 250 bits (276), Expect = 8e-62 Identities = 460/672 (68%), Gaps = 2/672 (0%) Strand=Plus/Plus Query 36658 AGCCGAAATTCTCGACTGCTGATGAGTGGCGGACATGGCAGGAAGCCGAAGGGCGTAAAC 36717 ||||||| ||| || ||||| |||| || | ||||| | |||||| || | Sbjct 2113 AGCCGAAGTTCAACACCGCTGAAGAGTTGCTTGCCTGGCATCGTACGGAAGGGGAGAAGC 2172 Query 36718 GCAGTGAAGAGCTTGACAGGATGAATCAGAAATCCCGCACCGAGAAGATTTTCGGACGTT 36777 |||| | |||||||| | | ||| || ||||| | ||| |||||||||||| | Sbjct 2173 GCAGCGCCGAGCTTGAGAAGGCGAACCAACGCGCCCGCGCAGAGCGGATTTTCGGACGCT 2232 Query 36778 CCGGAATTCAGGATTTACACCGCGGTTGCACGTTCGCCAATTACGAAGTTAACGGTGATG 36837 | || || || || |||||| ||||||||||| |||||| | || | | ||| | Sbjct 2233 CGGGGATCTGCGACTTGCACCGCAACTGCACGTTCGCGAATTACCAGGTGAGCAATGACG 2292 Query 36838 GCCAGCGTAAGGCTTTCACGATGGCTAAGAGCTATGCGCAGAACTTTGGCGCCGGATTTG 36897 | ||||| | || | | | ||| || ||||||||||| || || ||| || |||| Sbjct 2293 GGCAGCGCCACGCCCTGAGCAAGGCCAAAAGCTATGCGCAAAATTTCGGCATGGGTTTTG 2352 Query 36898 CGAGCTTTGTGTTCAGCGGTGGTCCGGGAACCGGGAAAAACCATCTTGCGGCGGCAATCG 36957 | || || ||||| || || || ||||| ||||||||||| || || || |||| Sbjct 2353 GCTGTTTCGTCTTCAGTGGCGGATGCGGTACCGGAAAAAACCATCTGGCTGCCGCGATCG 2412 Query 36958 GAAATCATCTGCTGGCCGGCGGTCATAGTGTTCTGGTGGTAACCATTCCTGACCTGATGC 37017 | || ||||||||||| ||| | || |||||||| ||||| || ||| |||||| Sbjct 2413 GTAACCATCTGCTGGCGAAGAATCACACGGTGCTGGTGGTTACCATCCCCGACTTGATGC 2472 Query 37018 TCAGGGTTCGTGAGTGCTACGACGGTGGGCAATCAGAAGCGTCCCTGCTTGATGACCTTT 37077 | | ||||| ||||||||||| || | || |||| | | | || || ||||| | Sbjct 2473 TGCGTGTTCGGCGCTGCTACGACGGCGGAGAGTCGGAAGGGGCATTACTCGACGACCTGT 2532 Query 37078 GCAAAGTTGACCTGCTGGTACTGGATGAAGTCGGTATTCAGCGTGGGAGCAGTGGTGAGA 37137 |||| || || ||||| || || || |||||||| | ||||| | | | || ||| Sbjct 2533 GCAAGGTCGATCTGCTCGTTCTCGACGAAGTCGGCGTGCAGCGCGAAACACGCGGCGAGT 2592 Query 37138 AGGTCATTCTCAATCAGGTTATCGATCGCCGTCTCTCATCGATGCGACCTGTTGGCGTTC 37197 ||| ||| | |||||| |||||||||| || || || ||| | || || || || Sbjct 2593 GGGTGATTTTGAATCAGATTATCGATCGTCGGCTGTCGTCGTTAAAGCCGGTGGGAATTT 2652 Query 37198 TGACGAATCTTAACCACGAGGG-GCTGTTGGATTCACTGGGCGCGAGGGTTATCGATCGC 37256 | || || | | | |||||| | | ||| | ||||| || || || || | Sbjct 2653 TAACCAA-CCTGAGTTCGAGGGAGTTAACCGATGTTTTAGGCGCAAGAGTCATGGACAGA 2711 Query 37257 CTCCAGATGGACGGAGGGATGTGGGTGAATTTTGACTGGGGAAGCTACCGGAAAAACGTT 37316 | |||||| || ||||| |||||| | || |||||||||||| || ||||| || Sbjct 2712 TTAACGATGGATGGCGGGATCTGGGTGGACTTCACCTGGGGAAGCTATCGAAAAAATGTA 2771 Query 37317 AGCCACCTCCGG 37328 |||||||| ||| Sbjct 2772 AGCCACCTGCGG 2783 >seq20436 Length=3738 Score = 122 bits (134), Expect = 3e-23 Identities = 295/445 (66%), Gaps = 4/445 (1%) Strand=Plus/Plus Query 44764 TCGACAAAAACAAAGTTAAGTGCTGCCGTTCTGGGGCTGGTGCTTGCCGGTGCGTCTGCG 44823 |||| ||| || || | || || || | |||| | || | |||||| || || || Sbjct 1344 TCGATAAAGACCAAACTTAGCGCCGCTATGCTGGCGTTGATTGCTGCCGGCGCATCGGCC 1403 Query 44824 TCAGTGAT--TCTCGACCAGTTTCTGGACGAAAAAGAAGGCAACCACACCACGGCATACC 44881 | || || | ||| ||||||| ||| ||||||||||| | | | || ||||||| Sbjct 1404 CCGGTCATGATGTCG--CAGTTTCAGGAAGAAAAAGAAGGACAGCGCCTGACTGCATACC 1461 Query 44882 GAGATGGCTCCGGCATATGGACCATCTGTCGCGGTGCCACAAAGGTGGACGGTAAACCCG 44941 || || |||||| ||||| || || |||| | || | ||| |||| | | Sbjct 1462 AGGACGGAGTCGGCATCTGGACAATTTGCGGCGGCGTGACGATGGTCAACGGCCAGAAGG 1521 Query 44942 TTGTTCGGGGCATGACGCTGTCAAAGGCGAAATGCGACCAGGTTAACGCTATTGAACGTG 45001 |||| ||| | ||| | | | | ||| | ||| || |||| || | Sbjct 1522 TTGTGAAGGGTCAGCGCCTGACCGCCGAGCAGTGCAAGCAGATTGACGCAGCAGAGCAGA 1581 Query 45002 ACAGGGCGCTGGCGTGGGTGGAGCGCAATATTAAAGTGCCGCTGACGGAACCACAGAAAG 45061 | | |||||| | ||||| || ||||| | || || ||||||| ||||| || |||| Sbjct 1582 AAAAGGCGCTCGACTGGGTAGACCGCAACGTCAAGGTAACGCTGACCGAACCGCAAAAAG 1641 Query 45062 CAGGTATTGCTTCTTTCTGCCCTTACAACATCGGCCCAGGAAAATGTTTCCCGTCTACGT 45121 || || || || |||||||| | ||||||||||| |||||||| ||| | || || | Sbjct 1642 TCGGGATCGCCTCGTTCTGCCCGTGGAACATCGGCCCCGGAAAATGCTTCACCTCCACCT 1701 Query 45122 TCTATAAGCGAATTAATGCTGGCGACCGTAAAGGAGCCTGTGAAGCTATTCGCTGGTGGA 45181 | || ||| | || || |||||||||| || ||||| || || ||| | |||| Sbjct 1702 TTTACAAGAAGCTGAACGCCGGCGACCGTATTGGCGCCTGCCGAGAAATCCGCCGTTGGA 1761 Query 45182 TTAAAGACGGTGGCCGCGATTGTCG 45206 | |||| |||||| ||||| || Sbjct 1762 TATTCGACGCTGGCCGAGATTGCCG 1786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151225547632528