Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_020201.1 Length=142349 Score E Sequences producing significant alignments: (Bits) Value seq54108 100 3e-16 >seq54108 Length=1175 Score = 100 bits (110), Expect = 3e-16 Identities = 208/310 (67%), Gaps = 0/310 (0%) Strand=Plus/Minus Query 77753 GGATTTCTTGAAGGAAATCGCATCACGAGGGGGCTCGAATCCGTTGGTGGAGTTGGTGAT 77812 ||| | ||||| ||| | | |||| || ||||| | || ||||||| |||| || Sbjct 919 GGACTGCTTGACGGACACCAGGCCACGCGGAGGCTCAATACCATTGGTGGCATTGGCAAT 860 Query 77813 TTGGCTGGATGTCTCGCAAGGCATCATCGTGGACAGCGTGGAGTTACGCAGGCCATGAAT 77872 |||||||| || || ||||||||| | || ||| |||||||| ||||| || || | Sbjct 859 CTGGCTGGAGGTTTCCGAAGGCATCAAGGCGGTCAGGGTGGAGTTGCGCAGACCGTGCTT 800 Query 77873 GGCGATGTCGATACGCAGCTTTTCCCAATCCATCTTCAGTTCCGCAGTGTGGAGTCCATC 77932 | ||||||| |||||| ||||||||||| | ||| | | || | || || Sbjct 799 GACGATGTCAGCACGCAGGGCTTCCCAATCCAGGTGCAGCGGCTCGTTGCAAATACCGTC 740 Query 77933 CACTTCTTTCTTGTAACGGTCGATCGGTAGAATACCCTGAGAGTAGGTGGTCTCGTGGAA 77992 || ||||||||||| |||| | || || | || | | ||||| || |||| || Sbjct 739 TACATCTTTCTTGTAGGTGTCGGTAGGCAGCAGTCCATTGGCATAGGTTGTTTCGTCAAA 680 Query 77993 GAGATCACATTTACCCAGTTCTTTTGCCAGGTCAACCGATGCTTCCAGCAGGTAATACTG 78052 | || || ||| ||| | || | ||||| || | || |||||| ||||| Sbjct 679 GGCGTCGCAAGGACCGTATTCACGCGACAACTGTACCGAAGCCTTCAACAGGTAGTACTG 620 Query 78053 GAATGCTTCA 78062 || |||||| Sbjct 619 GATGGCTTCA 610 Score = 82.4 bits (90), Expect = 7e-11 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 79392 CACAGGTTGGACTGTTTCACCGGAGCCTGTTCTGGGTCAAACGGGCTGTTAGTGTTGCAG 79451 |||||||||||||| ||| ||||| | || | | || ||||||| ||||||||| Sbjct 294 CACAGGTTGGACTGGCGCACGGGAGCGCGGTCGGCCTGGAATGGGCTGTGCGTGTTGCAG 235 Query 79452 TGGTCAACGTGCTGCACGTAAATACGGCCCGT-CTGTGAACGCTCTTGC 79499 ||||| |||| ||| | ||| |||||||| || ||| | |||||||||| Sbjct 234 TGGTCCACGTTCTGAATGTAGATACGGCCGGTGCTG-GCACGCTCTTGC 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454790920044480