Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq54108 131 1e-25 >seq54108 Length=1175 Score = 131 bits (144), Expect = 1e-25 Identities = 245/359 (68%), Gaps = 6/359 (2%) Strand=Plus/Plus Query 9687 ACATCACTTTATTCTCACCTCATAGTGTACCGGGTCTATACGATGCATACTTCGAAGACC 9746 ||||||| | ||||| |||||| || || ||||| ||||| || | ||| | |||| Sbjct 33 ACATCACGCTGTTCTCGCCTCATGACGTGCCCGGTCTGTACGAAGCCTTCTTTGCCGACC 92 Query 9747 AAGATAAGTTCGAGCGACTGTACACCAAAGCGGAATCTGATCCATCAATCGAAAAAGACA 9806 | || |||||||||| |||||| | ||| ||||| | ||| || || Sbjct 93 AGGACGAGTTCGAGCGTCTGTACGAGATGTACGAACAAGATCCCGCCATCCGCAAGCGCA 152 Query 9807 CAATCTCTGCTAAGGAAGCATTCAGCATACTAATGCAAGAGCGTGCTTCTACAGGTCGCA 9866 | ||||| ||| ||| | | || |||||||||||||| || || || | Sbjct 153 GCCTGCCTGCTGTGGAGCTGTTCTCCCTGCTGATGCAAGAGCGTGCCAGCACCGGCCGTA 212 Query 9867 TCTACATTCAGCACGTAGATCACTGTAACATTAACGGTCCTTTC---GATGAGCGCGTTG 9923 ||||||||||| |||| || ||||| |||| || | || ||| | || ||| | Sbjct 213 TCTACATTCAGAACGTGGACCACTGCAACACGCACAGCCCATTCCAGGCCGACCGC---G 269 Query 9924 CACCAGTACGCCAATCAAACCTATGTATGGAAATCGCACTACCAACCAAACCGTTGAATA 9983 | || || ||||| || ||||| || |||||||| || || || ||||| || ||||| Sbjct 270 CTCCCGTGCGCCAGTCCAACCTGTGCATGGAAATTGCCCTGCCCACCAAGCCTTTGAACG 329 Query 9984 ACGTCGATGATCCTGATGGTGAAGTTGCGCTATGTACTCTATCTGCATTCAACTTGGGT 10042 | | | ||||| || |||||| | ||||| || || || || || ||||| ||||| Sbjct 330 ATCTGAACGATCCCGAAGGTGAAATCGCGCTGTGCACGCTGTCGGCTTTCAATCTGGGT 388 Score = 125 bits (138), Expect = 5e-24 Identities = 207/299 (69%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 10437 TGCGTAATGAGATTGTCCATAATGGCCTACGTAACTCTACTCTATCTGCATTCATGCCTT 10496 ||||| ||| || ||| | | || || || ||||| || || | || || ||||||| Sbjct 783 TGCGTGCTGACATCGTCAAGCACGGTCTGCGCAACTCCACCCTGACCGCCTTGATGCCTT 842 Query 10497 CGGAAACATCTTCTCAGGTATCTAACGCAACAAACGGCATCGAACCACCTCGTGGCTACA 10556 ||||||| || ||| | | || || || || || || || || || |||||| Sbjct 843 CGGAAACCTCCAGCCAGATTGCCAATGCCACCAATGGTATTGAGCCTCCGCGTGGCCTGG 902 Query 10557 TGTCAGTTAAGCAGTCGAAGGATGGCATCTTAAAACAAATCGTACCGGGTTATGATAAAT 10616 |||| || |||||||| ||||| |||||||| || | || || | | ||| |||| Sbjct 903 TGTCCGTCAAGCAGTCCAAGGACGGCATCTTGCGTCAGGTGGTGCCTGAATTTGAAAAAT 962 Query 10617 ACAAAGACCAATACGAGTTACTATGGAATATCAAAGACAACACTGGTTACTTGGAATTGG 10676 | || || || |||||||| || ||| | || | ||| | ||| || | |||| Sbjct 963 ATAAGGATCAGTACGAGTTGCTGTGGCAAATGCCTGGTAACGACGACTACCTGAAGTTGG 1022 Query 10677 TTGCCATCATGCAGAAGTTTGTGGATCAGGCTATTTCAGCAAACACTAACTACGACCCA 10735 ||| | | ||||||||||| || || ||| | || || || ||||| ||||| |||||| Sbjct 1023 TTGGCGTGATGCAGAAGTTCGTTGACCAGTCGATCTCTGCGAACACCAACTATGACCCA 1081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342533768235608