Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq42731 132 1e-26 >seq42731 Length=1297 Score = 132 bits (146), Expect = 1e-26 Identities = 249/358 (70%), Gaps = 20/358 (6%) Strand=Plus/Minus Query 34729 CTTGATGCGCTTCAGATCTCCCTGGTTGATGGCGTAGAGTTCGCCGTCAATAACTCGCTT 34788 ||||| ||||||| | |||| ||||||||||| | || ||||||| || | ||| Sbjct 1075 CTTGAGGCGCTTCCATCCATCCTGATTGATGGCGTATACTTTTCCGTCAACAATTTTCTT 1016 Query 34789 ATT-ACCAGTATCAACAGCTACAGTTGCACCATCAGGAATGACTGGCTCCATACTGTCTC 34847 || | ||| | | || || || | || || ||||||| ||| ||||| |||| | Sbjct 1015 ATCGAGCAGGTTGATT-GCCACGGTAGTTCCTTCGGGAATGATTGGTTCCATGCTGTTCC 957 Query 34848 C-TGATGCAGGAAAACACAGGACACCAGAACCATCACTATTGGCTCCAACTCGACGGAGC 34906 | ||| ||||| ||||| || |||| || | || | || || || || || || Sbjct 956 CATGA-GCAGGGAAACATAGAACACT----CCCTTTCTGT--GCGCCCACGCGCCGTAGT 904 Query 34907 GTTGCTTTTGAAAAGCGCAATTTAAAACCGTTGTGATCCTCATCGTGT-----ACTCGTC 34961 || || || || || ||||| | || ||||| || || |||| | |||| | Sbjct 903 GTAGCCTTCGAGAATCGCAACATGAAGCCGTT---ATAGTCTTCGTCTCCATAACTC--C 849 Query 34962 CATCACCACACGCAAACTCGATATCCTTCAGAAACGGTACTTCCACCTCATCGTCAGGTA 35021 ||||||| || || | || ||||| || ||||| || |||||||||||||| || |||| Sbjct 848 CATCACCGCAGGCCAGTTCTATATCTTTTAGAAATGGCACTTCCACCTCATCATCGGGTA 789 Query 35022 GGGGGGTATTTTTGTCCCAAGCGTCGACAGTTCCCCACTCAGACTCTGGCGGGATGTT 35079 || ||| | | ||||| ||||| ||||| ||||| ||| ||||| |||||||| Sbjct 788 ACGGTGTACTGCTATCCCAGGCGTCTACAGTACCCCATTCATTTTCTGGTGGGATGTT 731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147374357047808