Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq40071 165 1e-35 seq99100 123 4e-23 >seq40071 Length=1032 Score = 165 bits (182), Expect = 1e-35 Identities = 199/269 (74%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 72091 TTTAAGGACGCTGCAGAGCAGGAGAAAGACTGGGCGAACTATCTATTCCAGGACGGGTCG 72150 || || ||||| || |||||||||||| | |||||| | || || |||| ||||| || Sbjct 131 TTCAAAGACGCAGCCGAGCAGGAGAAACAGTGGGCGGATTACCTGTTCCGCGACGGTTCC 190 Query 72151 ATGATCGGTCTGAACAAAGAGATCGTGTGCCAGTACATCGAATACATCACCAACATCCGT 72210 ||||| ||||||||||| || || || | |||||| | |||||||||||||| |||||| Sbjct 191 ATGATTGGTCTGAACAAGGACATTCTGGGACAGTACGTGGAATACATCACCAATATCCGT 250 Query 72211 ATTCGCGCCATCGG--TTACGATGACATCTACGCCGGTGTCAAAGCTAACCCAATCCCAT 72268 || | || | || | | | | | | | | |||||| ||||| || || | Sbjct 251 ATGGGTGCTGTGGGCCTGAAGCCTGCGTTTGAGTC--CGTCAAACACAACCCCATTCCCT 308 Query 72269 GGATCAACTCCTGGTTGGTTTCTGACAACGTGCAAGTCGCTCCACAGGAAGTGGAAGTAA 72328 |||||||| ||||| || || |||| |||||| || || || || || |||||| | | Sbjct 309 GGATCAACACCTGGCTGTCCTCGGACACCGTGCAGGTGGCACCTCAAGAGGTGGAACTGA 368 Query 72329 GTTCTTATCTGGTCGGTCAGATAGACTCG 72357 | ||||| |||||||||||||| |||||| Sbjct 369 GCTCTTACCTGGTCGGTCAGATCGACTCG 397 >seq99100 Length=988 Score = 123 bits (136), Expect = 4e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 266289 GTTTTCAGAAGAGATGTGCATGATCATCGGTTTCTTCTTCGGATCACGCATGTACGGTTT 266348 ||| |||| |||||||||| | || ||| ||||| |||| |||||||||| ||| | Sbjct 451 GTTCTCAGCCGAGATGTGCAACAGCAACGGCTTCTTGGTCGGGTCACGCATGTGCGGCGT 392 Query 266349 GTTAAAGGTAGCGATCTGACGTGT-CAGGTCCATGGTGAAACCGGTCTTGTTGTTGTGCT 266407 || | || | || | || || || || ||||| |||||||||| |||||||| Sbjct 391 ATTGTACAACGCCAAGTG-CTTGAACAAGTTCAGCGTGAAGCCGGTCTTGTAGTTGTGCT 333 Query 266408 GCAATGCACCAATCAAGACGAACTCACTGCGACGGAACCCACCCACTTCACCCAGCATGC 266467 ||| |||||| |||| ||||||||||| || ||||||||||| || |||||||||| Sbjct 332 GCAGTGCACCGATCAGGACGAACTCACCACGTCGGAACCCACCGTGGTCGCCCAGCATGC 273 Query 266468 GGTTGATGCCGGTGTAGCCTGTCTT 266492 | ||||| | |||||||||| Sbjct 272 GATTGATCGCTTGCCAGCCTGTCTT 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 866202068263680