Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq67205 176 1e-39 >seq67205 Length=1564 Score = 176 bits (194), Expect = 1e-39 Identities = 441/660 (67%), Gaps = 20/660 (3%) Strand=Plus/Minus Query 32156 GCGCTCGGC---CTCGGCTGCTTCGCGGGCAATGCGCTCCTCGCGCTCTTTCTGCTCGCG 32212 ||||| ||| |||||| ||||||||||| |||||||| || || || ||||| |||| Sbjct 1555 GCGCTGGGCGCGCTCGGCCGCTTCGCGGGCGATGCGCTCTTCACGTTCCTTCTGTGCGCG 1496 Query 32213 TGCTGCTGCTTCGGCGCGCAGGCGTTCCAGTTCGGCCTGCTCGGCTTCGAACTTCTCACG 32272 | ||| | |||| |||||||| ||||||||||||||||||| ||| ||||||| || Sbjct 1495 CTCGGCTTCAGCGGCACGCAGGCGCGCCAGTTCGGCCTGCTCGGCGTCGTACTTCTCGCG 1436 Query 32273 GGCAACCAGGGCTTC--TCGGAGAGCGATCAAAGCCTTAT-CTTTGGCGCGAGCAGCCTC 32329 || ||||||||| || | || ||| | | | ||| |||| ||||| Sbjct 1435 CGCCGCCAGGGCTTGCGTCAGGGA---ATCCTGGGCGCGGGCCTTGACGCGGTGCGCCTC 1379 Query 32330 TGCCTCGAACTCTTCCCAGGCTTCACTTATGGCCAGGCCTTCCAACCAAGCGATGTTGGC 32389 |||||| | || ||||||| || | ||| || | | | | ||||| | || Sbjct 1378 GGCCTCGTATTCCTCCCAGGACGCATCCACGGCGCGGGCATTGACCTGTTCGATGGTCGC 1319 Query 32390 TTTGAGTTCATTAGAGTCCAGATCGCGGCATTC--CAG-GCGAAGGTTTATCTTATCGAT 32446 || || | ||||| |||||| || | | ||| ||| | | ||||| Sbjct 1318 GCGCAGCTCGGCCGCATCCAGGTCGCGGTTCTCGTCGGCGCGCAGGCGGAACCACTCGAT 1259 Query 32447 CTCGCCCTGATGACGCGCAACCCGCGCCGCTTCAGCCTCTTCCCACTCGGTCAACGGACT 32506 | ||| || ||| ||||| | || || ||||||||||||| | ||| Sbjct 1258 ACCCTGCTGGTGGCGCTGCTGGCGCGCTTCCTCGGCGGCTTCCCACTCGGTGAGCGGCGC 1199 Query 32507 GCGCAC---TTCGGCCTGCCAGGAATCCAACAGGTCGCGCATCCGCTTACGCTCGGCATC 32563 |||||| ||||||| | || |||| ||||||||| ||||| |||||||| || Sbjct 1198 GCGCACCTCTTCGGCCAG---GGCGTCCAGGGCGTCGCGCATGCGCTTGCGCTCGGCGTC 1142 Query 32564 GATCTTCTTCGGAACTTCCTTCAGCTCAGCGACCAATTCCTTGCCCACGTTGTCCAGCGC 32623 || ||| || || ||||||||||| |||||| || |||||||| | ||| ||||| Sbjct 1141 AATGCGCTTGGGCACATCCTTCAGCTCGTCGACCAGTTGCTTGCCCAGGGCGTCGAGCGC 1082 Query 32624 CGTCTTGGAGCGGGCG-ACCTTGTAGGCGATGGAAGCGATGGCATCGCGGCCCTTGCGGG 32682 | |||||| | ||| |||||| | || | | || |||| ||||||||||| | Sbjct 1081 GGCCTTGGA-CTTGCGCACCTTGAACGCCAGGCTGGCAGTGGCCTCGCGGCCCTTCTTCG 1023 Query 32683 TTGAAACGTCCGGCACGAAGCCGTCGATTTCCTCGCGAATCTTGGCCAGGAACGGGTCAA 32742 | | | |||||||||| ||| | || |||| |||||| | || | || || | Sbjct 1022 TCGTCATGTCCGGCACGTGGCCCGACACCTCGGCGCGGATCTTGTCGAGCCAGGGTTCCA 963 Query 32743 GGCCATTGGCTGCCGAGTAGACTTGCAGAGCGGTTTCTTTGGCTGGTACTTCGACCAGTT 32802 |||| || ||| || || | ||| |||||||| | || || | ||| | |||| Sbjct 962 GGCCGGAGGGCTTCGAATACACCTCCAGCGCGGTTTCCTGGGGCGGCAGTTCAGCAAGTT 903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145456751777408