Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq54108 123 2e-23 >seq54108 Length=1175 Score = 123 bits (136), Expect = 2e-23 Identities = 266/393 (68%), Gaps = 15/393 (4%) Strand=Plus/Minus Query 123187 CTTCGCCAAGTAATACGCCAGGTTGGTCCAGCCAATACCCAGCGTTCGACGATCCTTAGT 123246 ||| |||| ||| || || |||| | ||||| ||||| | ||||| | || || Sbjct 556 CTTGGCCAGGTAGTAAGCGTAGTTGATGACGCCAACGCCCAGGGAGCGACGCTTGTTGGT 497 Query 123247 C---TTCTCTGCCGCCAGTACCGGGTAGTTCTGGTAGTCCAACAGACGGTCAAGTGAGCG 123303 ||| ||| ||| |||||||||| ||| ||||||| || | || || | ||| Sbjct 496 TGCGTTCAGTGCAGCCTTGACCGGGTAGTCCTGATAGTCCAGCAAAGCATCCAGAGCGCG 437 Query 123304 CACCA--AGGTGCGTACCGGGCCACGGAGGTCTTCCAGACTCTCTACCTTGCCGAGGTTG 123361 || | || | | || | || || || ||||| ||| | || || ||| Sbjct 436 AACAATCAGTTCAG--CCAGACCGTCCAGCTCGTCCAGGGACTCCAGAGCACCCAGATTG 379 Query 123362 ATTGCAGACAGCGTACAAAGTGCAATCTCGCCATCGTCCTCAGGATTTTTGAGGTCATTG 123421 | || |||||||| || || || || || || ||| |||| || || || || Sbjct 378 AAAGCCGACAGCGTGCACAGCGCGATTTCACCTTCG------GGATCGTTCAGATCGTTC 325 Query 123422 ATCGCGTGAGTAGGCAGGGCAATCTCCATGCACAGGTTGGACTGTTTCACCGGGGCCAGT 123481 | | | || ||||||||||| |||||||||||||||||||| ||| || || | Sbjct 324 AAAGGCTTGGTGGGCAGGGCAATTTCCATGCACAGGTTGGACTGGCGCACGGGAGCGCGG 265 Query 123482 TCTGGATTGAACGGGCTGTTGGTGTTGCAGTGGTCAACGTGCTGAATGTAGATGCGTCCT 123541 || | | ||| ||||||| |||||||||||||| |||| |||||||||||| || || Sbjct 264 TCGGCCTGGAATGGGCTGTGCGTGTTGCAGTGGTCCACGTTCTGAATGTAGATACGGCCG 205 Query 123542 GT-CTGACTGCGCTCCTGCATAGCCACGGAGAA 123573 || ||| | ||||| ||||| || |||||| Sbjct 204 GTGCTGGC-ACGCTCTTGCATCAGCAGGGAGAA 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485390692788480