Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq782 143 3e-29 seq21443 122 8e-23 seq465 118 1e-21 seq10591 114 1e-20 seq621 104 2e-17 seq10379 100 3e-16 seq23525 89.7 5e-13 seq14565 89.7 5e-13 seq1867 89.7 5e-13 seq1776 89.7 5e-13 seq18355 82.4 7e-11 >seq782 Length=6300357 Score = 143 bits (158), Expect = 3e-29 Identities = 152/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || ||||| || || ||| | | | || || ||||| || || Sbjct 3450621 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCA-TCTTCCAGCTGTTTCCC 3450563 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | || ||||||||| |||||||||||||||||||| ||||||| ||| Sbjct 3450562 AGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTTGCCTT 3450503 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||||| ||||| ||||||| || |||| ||||| ||| ||||| ||||| || Sbjct 3450502 GACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGT 3450443 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 3450442 CTTCACGAAGATCTGCAT 3450425 >seq21443 Length=656158 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 30124 GGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 30182 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| |||||||||||| || ||||||||||| || ||| || || Sbjct 30183 CTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCT 30242 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| |||||||||| || | ||||| ||| ||||||||||| | Sbjct 30243 TCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 30302 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 30303 TCTTCACGAAGATCTGCAT 30321 >seq465 Length=2116526 Score = 118 bits (130), Expect = 1e-21 Identities = 150/201 (75%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| || | ||| | | | || || ||||| |||| Sbjct 2111666 GGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCA-TCTTCCAGCTGTTTGC 2111608 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | || || ||||||||||| || ||||| || |||||||| ||| ||| || Sbjct 2111607 CGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTC-TTGAATTTTGGCT 2111549 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | ||||| ||||| ||||||| || || | ||||| ||||||||| || || Sbjct 2111548 TTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTTTTGCCCGTGAGG 2111489 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || || || ||||||||| Sbjct 2111488 GTCTTCACAAAGATCTGCATG 2111468 >seq10591 Length=527945 Score = 114 bits (126), Expect = 1e-20 Identities = 149/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||||||||| || || ||||| || | ||| | | | || || ||||| |||| Sbjct 132124 GGTGGACTCTTTGTGGATGTTGTAGTCTGAGAGAGTGCGGCCA-TCTTCCAGCTGTTTGC 132182 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | || || ||||||||||| || ||||| || |||||||| ||| ||| || Sbjct 132183 CGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTC-TTGAATTTTGGCT 132241 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | ||||| ||||| ||||||| || || | ||||| ||||||||| || | Sbjct 132242 TTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTTTTGCCCGTGTGG 132301 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || ||||| || ||||||||| Sbjct 132302 GTCTTTACAAAGATCTGCATG 132322 >seq621 Length=1137327 Score = 104 bits (114), Expect = 2e-17 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 133458 TGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTG 133516 || |||||||||| ||| || || ||||| || | ||| | | | ||||| ||||| Sbjct 429907 TGCATGGTGGACTGTTTTTGGATGTTGTAGTCTGAGAGAGTGAGGCCA-TCCTCCAGCTG 429965 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | || || ||||||||||| || ||||| || |||||||| ||| || Sbjct 429966 CTTGCCAGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTC-TTGAATTT 430024 Query 133577 TTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | || |||| | |||| |||| ||||||| || || | ||||| ||| ||||| | Sbjct 430025 TGGCTTTGAAATTCTCAGTGGTGTAACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCG 430084 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || || || | |||||| Sbjct 430085 TGAGGGTCTTCACAAAGAGCTGCAT 430109 >seq10379 Length=4916278 Score = 100 bits (110), Expect = 3e-16 Identities = 146/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| || | ||| | | | || || |||| |||| Sbjct 1637635 GGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCA-TCTTCCAGCTAATTGC 1637577 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | || || ||| |||||| || ||||| || ||||||| | ||| |||| || Sbjct 1637576 CAGCAAATATCAGATGCTACTGGTCAGGTGGGATACCCTCCTTGT-GTTGAACTTTGGCT 1637518 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 ||| | ||||| ||||| ||||||| || || | || || ||||||||| || || Sbjct 1637517 TTGTCATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGGGATGGTTTTGCCTGTGAGG 1637458 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || || || ||||||||| Sbjct 1637457 GTCTTCACAAAGATCTGCATG 1637437 >seq23525 Length=221919 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || |||||||| || || || | | | || || || |||||||| Sbjct 219811 GTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCC 219869 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || | ||||| || ||||| || |||||||| || |||||| ||| Sbjct 219870 AGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTT 219929 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||| || | ||| || || |||| ||||| ||| || || || || || Sbjct 219930 TACATTTTCTATCGTATCTGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTAAGGGT 219989 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| Sbjct 219990 TTTCACGAAAATCTGCAT 220007 >seq14565 Length=1636251 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/200 (71%), Gaps = 13/200 (7%) Strand=Plus/Minus Query 133465 TGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCC---TCGAGCTGCTTGC 133521 ||||||||||||| || ||| | || || | |||| | || |||| |||| Sbjct 1463601 TGGACTCTTTCTGGATGTTGCAGTC--------TGAAAGAGTGCGGCTCCGGCTGTTTGC 1463550 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-C 133580 |||| | || || ||||||||||| | |||||||| |||||||| ||| ||| | | Sbjct 1463549 CCGCAAATATCAGACGCTGCTGGTCAAGTGGGATGCCCTCCTTGTC-TTGAATTTTGGCC 1463491 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | |||| ||||| ||||||| || |||| ||||| | | | || || || Sbjct 1463490 TTGACGTTCTCAGTGGTGTCACTGGGCTCGACCTCGAGGGTGATGATCCTACCTGTGAGG 1463431 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || || || |||||||| Sbjct 1463430 GTCTTCACAAAGATCTGCAT 1463411 >seq1867 Length=10309187 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| || |||||||| || ||||| || | ||| | | | || || |||||| ||| Sbjct 6956560 GGTCGATTCTTTCTGGATGTTGTAGTCAGAAAGAGTGTGGCCA-TCTTCCAGCTGCATGC 6956502 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| |||||||| ||| |||||||||||| || || || || Sbjct 6956501 CTGCAAAGATGAGCCTCTGCTGGTTGGGGAAGATGCCTTCCTTATCCTGAATATTGGCCT 6956442 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| |||||||||| || | ||||| ||| ||| | ||||| | Sbjct 6956441 TCACATTTTCGATGGTGTCACTGGGCTCCACATCAAGGGTGATGGTCTTGTCAGTCAGGG 6956382 Query 133642 TTTTTACGAAAATCTGCA 133659 | || ||||| | ||||| Sbjct 6956381 TCTTCACGAAGACCTGCA 6956364 >seq1776 Length=1009680 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || |||||||| || || || | | | || || || |||||||| Sbjct 76278 GTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCC 76220 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || | ||||| || ||||| || |||||||| || |||||| ||| Sbjct 76219 AGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTT 76160 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||| || | ||| || || |||| ||||| ||| || || || || || Sbjct 76159 TACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGT 76100 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| Sbjct 76099 TTTCACGAAAATCTGCAT 76082 >seq18355 Length=1729477 Score = 82.4 bits (90), Expect = 7e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||||| ||| || || || || || | ||||| |||| ||||| Sbjct 213895 GGTGGACTCTTCCTGGATGTTCTAGTCTGAGGGACTGCAGCCATCCTCCGGCTGTTTGCC 213954 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 ||| | || || | ||||||||| || ||||||| |||||||| ||| || || | Sbjct 213955 CGCAAATATCAGACACTGCTGGTCAGGCAGGATGCCCTCCTTGTCTTGGAT-TTCGGCTT 214013 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||| |||| |||||| || | ||||| ||| ||||| | || | Sbjct 214014 TGACATTCTCAGTGGTGTCAGTGGCCTCCACCTCAAGGGTGATGGTCTTGCCCATGAGGG 214073 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||| ||| Sbjct 214074 TGTTCACAAAGATCTCCAT 214092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482786116831680