Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq67205 163 1e-35 >seq67205 Length=1564 Score = 163 bits (180), Expect = 1e-35 Identities = 429/648 (66%), Gaps = 15/648 (2%) Strand=Plus/Plus Query 4864 AACTGGTCGAAGTACCAGCCAAAGAAACCGCTCTGCAAGTCTACTCGGCAGACAATGGCC 4923 |||| | ||| | || || | |||||||| ||| | || || ||| | |||| Sbjct 903 AACTTGCTGAACTGCCGCCCCAGGAAACCGCGCTGGAGGTGTATTCGAAGCCCTCCGGCC 962 Query 4924 TGGATCCATTCCTGGCCAAGATTCGCGAAGAGATCGACGGCTTCGTGCCGGATGTGACCA 4983 |||| || | || | |||||| |||| ||| | ||| ||||||||| |||| | Sbjct 963 TGGAACCCTGGCTCGACAAGATCCGCGCCGAGGTGTCGGGCCACGTGCCGGACATGACGA 1022 Query 4984 CTCGCAAGGGCCGAGAGGCAATCGCTTCCATCGCCTACAAGGTAGCCCGCTCCAAGACGG 5043 | |||||||| ||||| | || | | || | |||||| | |||||| | | Sbjct 1023 CGAAGAAGGGCCGCGAGGCCACTGCCAGCCTGGCGTTCAAGGTGCGCAAGTCCAAGGCCG 1082 Query 5044 CGCTGGACAACGTGGGCAAGGAATTGGTCGCTGAGCTGAAGGAGGTCCCGAAGAAGATCG 5103 |||| ||| | |||||||| || |||||| ||||||||||| || || ||| || | Sbjct 1083 CGCTCGACGCCCTGGGCAAGCAACTGGTCGACGAGCTGAAGGATGTGCCCAAGCGCATTG 1142 Query 5104 ATGCCGAGCGTAAGCGGATGCGCGATCTGTTGGATTCCTGGCAGGCCGAA---GTGCGCA 5160 | |||||||| ||||| |||||||| |||| || | ||||||| |||||| Sbjct 1143 ACGCCGAGCGCAAGCGCATGCGCGACGCCCTGGACGCC---CTGGCCGAAGAGGTGCGCG 1199 Query 5161 GTCCGTTGACCGAGTGGGAAGAGGCTGAAGCGGCGCGGGTTGCGCGTCATCAGGGCGAGA 5220 ||| | ||||||||||||| || || | ||||| ||| || ||| | | Sbjct 1200 CGCCGCTCACCGAGTGGGAAGCCGCCGAGGAAGCGCGCCAGCAGCGCCACCAGCAGGGTA 1259 Query 5221 TCGACAAGATAAACCTTCGC-CTG--GAATGCCGCGATCTGGACTCTAATGAACTCAAAG 5277 |||| | | ||| ||| | | || |||||| ||||| | || || | Sbjct 1260 TCGAGTGGTTCCGCCTGCGCGCCGACGAGAACCGCGACCTGGATGCGGCCGAGCTGCGCG 1319 Query 5278 CCAACATCGCTTGGTTGGAAGGCCTGGCCATAAGTGAAGCCTGGGAAGAGTTCGAGGCAG 5337 | | ||||| | | | | || ||| | || ||||||| || | |||||| | Sbjct 1320 CGACCATCGAACAGGTCAATGCCCGCGCCGTGGATGCGTCCTGGGAGGAATACGAGGCCG 1379 Query 5338 AGGCTGCTCGCGCCAAAG-ATAAGGCTTTGATCGCTCTCCGA--GAAGCCCTGGTTGCCC 5394 |||| |||| ||| | | | ||| || | || ||||||||| || | Sbjct 1380 AGGCGCACCGCGTCAAGGCCCGCGCCCAGGAT---TCCCTGACGCAAGCCCTGGCGGCGC 1436 Query 5395 GTGAGAAGTTCGAAGCCGAGCAGGCCGAACTGGAACGCCTGCGCGCCGAAGCAGCAGCAC 5454 | ||||||| ||| ||||||||||||||||||| |||||||| |||| | ||| | | Sbjct 1437 GCGAGAAGTACGACGCCGAGCAGGCCGAACTGGCGCGCCTGCGTGCCGCTGAAGCCGAGC 1496 Query 5455 GCCAGCAGAAAGAGCGCGAGGAGCGCATTGCCCGCGAAGCAGCAGAGC 5502 || ||||| || || || |||||||| ||||||||||| || |||| Sbjct 1497 GCGCACAGAAGGAACGTGAAGAGCGCATCGCCCGCGAAGCGGCCGAGC 1544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194576210778704