Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_028660.1 Length=61035 Score E Sequences producing significant alignments: (Bits) Value seq20436 125 3e-24 >seq20436 Length=3738 Score = 125 bits (138), Expect = 3e-24 Identities = 198/282 (70%), Gaps = 4/282 (1%) Strand=Plus/Minus Query 4855 TGTCGATACCCCAGCATGCCAGCGCACTCTCCTGGTCGCGACGGGATACCTGACCGTAGC 4914 |||| | |||||||| ||||| | ||||| ||||| || | ||| ||||||| Sbjct 1863 TGTCCAATCCCCAGCAAGCCAGTTCGGCTTCCTGATCGCGCCGTACGATCTGCCCGTAGC 1804 Query 4915 AATTATTTGAGCGGATACGGCAGTCTCTGCCACCGTCCTTAATCCACCAGCGAATCGCTT 4974 | ||||| || ||||| ||||| |||| |||| |||| ||||| | ||| || || Sbjct 1803 AGTTATTCGAACGGATGCGGCAATCTCGGCCAGCGTCGAATATCCAACGGCGGATTTCTC 1744 Query 4975 CACACGCTCCCCTGCGATCGCCTGCATTAA--TTCGTTTATAAAACGTCGACGGGAAACA 5032 || || || | || ||||| || || | ||| || ||||| || || | ||| || Sbjct 1743 GGCAGGCGCCAATACGGTCGCCGGCGTTCAGCTTC--TTGTAAAAGGTGGAGGTGAAGCA 1686 Query 5033 CTTACCGGGGCCAATGTTGTAAGGACAGAATGACGCGATCCCCGCTTTCTGAGGTTCGGT 5092 || |||||||| ||||| | || ||||| || |||||||| |||| || |||||||| Sbjct 1685 TTTTCCGGGGCCGATGTTCCACGGGCAGAACGAGGCGATCCCGACTTTTTGCGGTTCGGT 1626 Query 5093 CAGTGGCACTCTGATGTTTTTCGCCACCCATGCCAGCGCCTT 5134 ||| | || ||| ||| | ||||| | |||||||| Sbjct 1625 CAGCGTTACCTTGACGTTGCGGTCTACCCAGTCGAGCGCCTT 1584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194946947797648