Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_028672.1 Length=149732 Score E Sequences producing significant alignments: (Bits) Value seq54108 172 5e-38 >seq54108 Length=1175 Score = 172 bits (190), Expect = 5e-38 Identities = 494/747 (66%), Gaps = 27/747 (4%) Strand=Plus/Minus Query 25299 GGATTTCTTGAAGGAAATCGCATCACGAGGTGGCTCAAAACCGTTCGTGGAGTTGGTAAT 25358 ||| | ||||| ||| | | |||| || ||||||| ||| || |||| |||| ||| Sbjct 919 GGACTGCTTGACGGACACCAGGCCACGCGGAGGCTCAATACCATTGGTGGCATTGGCAAT 860 Query 25359 CTGACTGGACGTCTCGCAAGGCATCATCGTGGACAGCGTAGAGTTACGCAGTCCATGAAT 25418 ||| ||||| || || ||||||||| | || ||| || ||||| ||||| || || | Sbjct 859 CTGGCTGGAGGTTTCCGAAGGCATCAAGGCGGTCAGGGTGGAGTTGCGCAGACCGTGCTT 800 Query 25419 AGCGATGTCGATACGCAGCTTTTCCCAATCCATCTTCAGTTTCGCAGTGTGGAGGCCATC 25478 ||||||| |||||| ||||||||||| | ||| | | || | || || Sbjct 799 GACGATGTCAGCACGCAGGGCTTCCCAATCCAGGTGCAGCGGCTCGTTGCAAATACCGTC 740 Query 25479 TACCTCTTTCTTGTAACGGTCGATCGGCAGAATGCCCTGAGAGTATGTGGTCTCGTGGAA 25538 ||| ||||||||||| |||| | ||||| | || | | || || || |||| || Sbjct 739 TACATCTTTCTTGTAGGTGTCGGTAGGCAGCAGTCCATTGGCATAGGTTGTTTCGTCAAA 680 Query 25539 GAGATCACATTTGCCCAGTTCTTTTGCCAGGTCAACCGACGCTTCCAGCAGGTAATACTG 25598 | || || || ||| | || | ||||| || | || |||||| ||||| Sbjct 679 GGCGTCGCAAGGACCGTATTCACGCGACAACTGTACCGAAGCCTTCAACAGGTAGTACTG 620 Query 25599 GAATGCTTCAGCCAGTTCGT--GAACAG--CATTTGCTGCACGAGGATCGCTGTACTTCA 25654 || |||||| || || | ||| | ||||| || ||| ||| Sbjct 619 GATGGCTTCAAAG-GTACGGTGGGTCAGGCCCAACGCTGCC---GGGTCGGAGTAACGGG 564 Query 25655 GGCCACGCTTCGCCAGGTAATATGCTAAGTTGGTCCAGCCAATACCCAGAGTACGTCGCA 25714 ||| ||| |||||||| || || ||||| | ||||| ||||| | || ||| Sbjct 563 TGCCGTTCTTGGCCAGGTAGTAAGCGTAGTTGATGACGCCAACGCCCAGGGAGCGACGCT 504 Query 25715 GTTTAGTC---TTCTCTGCCGCCAGAACCGGATAGTTCTGATAATCTAACAGACGATCCA 25771 || || ||| ||| ||| ||||| |||| |||||| || | || | ||||| Sbjct 503 TGTTGGTTGCGTTCAGTGCAGCCTTGACCGGGTAGTCCTGATAGTCCAGCAAAGCATCCA 444 Query 25772 ATGCACGAACCAGT-GTACGGACAGGCTCACGCATGTCTTCCAGCTTCTCCACCTTGCCG 25830 || ||||| | || | | ||| | | || || ||||| ||||| || Sbjct 443 GAGCGCGAACAATCAGTTCAGCCAGACCGTC-CAGCTCGTCCAGGGACTCCAGAGCACCC 385 Query 25831 AGGTTGATGGCAGACAGAGTACACAGGGCCACTTCCCC--CGGG-TCGTTCGGATCATTA 25887 || |||| || ||||| || ||||| || | ||| || |||| |||||| |||| || Sbjct 384 AGATTGAAAGCCGACAGCGTGCACAGCGCGATTTCACCTTCGGGATCGTTCAGATCGTTC 325 Query 25888 ATGTCCGTAATCGGATGTGTCGGCAGGGCGATTTCCATGCACAGGTTGGACTGTTTCACC 25947 | || || | || |||||||| ||||||||||||||||||||||| ||| Sbjct 324 A-------AA--GGCTTGGTGGGCAGGGCAATTTCCATGCACAGGTTGGACTGGCGCACG 274 Query 25948 GGGGCCTGTTCGGGGTCGAACGGGCTATTAGTGTTGCAGTGGTCAACGTGCTGCACGTAA 26007 || || | |||| | ||| ||||| | |||||||||||||| |||| ||| | ||| Sbjct 273 GGAGCGCGGTCGGCCTGGAATGGGCTGTGCGTGTTGCAGTGGTCCACGTTCTGAATGTAG 214 Query 26008 ATACGGCCTGT-CTGAGAACGCTCCTG 26033 |||||||| || ||| | |||||| || Sbjct 213 ATACGGCCGGTGCTG-GCACGCTCTTG 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478385501994240