Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq96681 150 4e-31 >seq96681 Length=1473 Score = 150 bits (166), Expect = 4e-31 Identities = 432/655 (66%), Gaps = 21/655 (3%) Strand=Plus/Minus Query 305951 TGAATCTCGAATTCGTCTTGAGCAATCTTCTTCACGGCATTCGCAATGGGCTGGAATTGA 306010 || |||||| | ||||| ||| ||||||| |||||| || || |||||| ||| || Sbjct 687 TGGATCTCGTACTCGTCCTGACAGATCTTCTGCACGGCCTTGGCGATGGGCATGAACAGA 628 Query 306011 CCAGTCTTACCAATAGCGAAAGTCACAGCGAACGACGCCAGGAACTGAATACGCTCCAGG 306070 || || || || ||||| ||||||||||| ||||||| |||||| || ||||||||| Sbjct 627 CCGAGCTCGCCGATGGCGAAGGTCACAGCGAAGGACGCCATGAACTGGATGCGCTCCAGG 568 Query 306071 A--AG------TACAGTGCA-ATGAAG--AACAT-GAAGATCTTGTTGTAGAGTTCTTGG 306118 | || || ||| | |||||| ||| | |||||||| || || ||| | Sbjct 567 ATCAGCATCGCCACGGTGAACATGAAGGCCGCATCGTAGATCTTGATGAAGTCTTCCTTC 508 Query 306119 TTGTTC---TCTACTTGACCCAGGGAGTAACGGT--GCGACCAGTCGTGGGCTTCACCCA 306173 |||||| || | ||||||||| ||| ||| | ||||| ||| ||| | ||| Sbjct 507 TTGTTCTTGTCCAGCAGACCCAGGGCGTACTGGTGGGAGACCA--CGTAGGCGTTCTCCA 450 Query 306174 TGACCTTAGCAACTGCCACCATGCGCT-CTTGTGCTTCTTCTACGCGAAGGATCTCATCG 306232 ||| ||| || || | || |||| | || ||||| | ||||| |||| ||||| Sbjct 449 TGATCTTGGCGACCACAGACAGACGCTGCATG-GCTTCCTTGACGCGCAGGACTTCATCC 391 Query 306233 AGGATCGCTGACGGGTTGCTGAAGCTGTTACGCACGATCTCCGAGTACGTCAGAGCGTGT 306292 || | | || || | | |||| || ||||| |||||||| ||| |||||| Sbjct 390 AGCACGACCGAGGGATCGTCGAAGGACAGGCGTACGATTTCCGAGTAGGTCGAAGCGTGC 331 Query 306293 ACGTTTTCATTGTCATTGATACGAACGTAACCCGACCAAACACGAGAATCGGACATGACC 306352 | ||| ||||| ||||||| | | | | | | | |||| |||| | Sbjct 330 AGCACTTCGTTGTCGGTGATACGGCCCCAGGCAGCCTGCAGTTCCGGTGCGGAGATGAAC 271 Query 306353 GGAGCCAAGATGTTCACAATCGAACGGCTGGCCACAGAGTCAGCTTCCCACTGCCAGGCT 306412 || |||| ||| || |||| |||| || || ||||||||||||||||||||||| Sbjct 270 GGTGCCATGATCGGCAGGATCGTACGGGCAGCGACCGAGTCAGCTTCCCACTGCCAGGCC 211 Query 306413 AGCGTCTTGATCATCATGTCGTAAGTGGACCGATCACAGGTCTCGAACTCCACCAGGCAG 306472 || || | |||| |||| | ||| ||||| ||| || | |||| Sbjct 210 AGGGTGCGGGTCATGCAGTCGGCGATCGACTTGGGCTGGGTCTTGAATTCGGCGTTGCAG 151 Query 306473 TCGCCATAGGGGAATTCGTTCTCATCCCAGTCCAGCATCTTCAGACGCTTGTACAGGCCC 306532 | || || ||| ||||| || |||||||||||| || |||||| | || Sbjct 150 ACTTCAAAGCCGAACTCGTTTTCGTCCCAGTCCAGCGAACGCATGTTCTTGTAGATTTCC 91 Query 306533 CACAGCACCGGGTAATGATTGTGGATAGTATCCAGCAGCCCCGGTTCTTGACCCA 306587 || | |||||| |||| || || || | ||| |||||||| ||||||| Sbjct 90 CAGATTTCCGGGTGGACCTTGTTGACGGTGTCAAACAGGCCCGGTTCCTGACCCA 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988003030437896