Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_029066.1 Length=48666 Score E Sequences producing significant alignments: (Bits) Value seq95672 104 7e-18 >seq95672 Length=837 Score = 104 bits (114), Expect = 7e-18 Identities = 197/287 (69%), Gaps = 10/287 (3%) Strand=Plus/Plus Query 17536 CGCACGCTGCTCCAGAACGCAAAGTTGTGGTCGATGCTGGCCGACATAGCCCGTCAGGTC 17595 |||||||| |||| || ||| ||| ||||||||| |||| | | || ||| | Sbjct 223 CGCACGCTCAGCCAGTCGGCCAAGCTGTACGCGATGCTGGGCGACGTCTCGCGGCAGCTT 282 Query 17596 GAATGGCCCGTAAACGGCGTTATGCAGCGCCTGGACGCCGAGGACTGGAAAGCCCTGAT- 17654 ||||||||||| |||||| ||| |||| ||| || ||| |||||||| ||| || | Sbjct 283 GAATGGCCCGTGAACGGCAAGATGGAGCGTCTGAGCGTCGATGACTGGAAGGCCGTGGTT 342 Query 17655 ---GACCGCCGCGTGCCGCCAAGAGATCCGCATGGCTGCCGGCATTGGCGGGGGCGTCGT 17711 | | ||| | || || |||| |||||||| ||||| | |||| ||| |||| Sbjct 343 GTGGCCAGCCTCATG----CAGGAGAAGCGCATGGCGGCCGGTTTGCGCGGCGGCTTCGT 398 Query 17712 GATGCTTGGCGTATCG-ACCCGCCGCATGACCGTAGCTGAGATGGGTGACTTGATTGAGT 17770 || || ||| | || ||| || |||| | | || ||| || || |||| Sbjct 399 CATCCTGGGC-AAGCGCACCAGCTCGATGAGCATCCGGGAAATGTCCGATGCCATCGAGT 457 Query 17771 TCATGTACTCCTTCGGCGCCGAGCGCGGCGTGGAGTGGCGCGAGCCG 17817 || ||||| ||||||||| |||| |||||| ||||| |||||| Sbjct 458 TCCTGTACAGCTTCGGCGCGGAGCAGGGCGTGCAGTGGTCTGAGCCG 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155415515148352