Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_029120.1 Length=60875 Score E Sequences producing significant alignments: (Bits) Value seq42731 100 1e-16 >seq42731 Length=1297 Score = 100 bits (110), Expect = 1e-16 Identities = 210/309 (68%), Gaps = 12/309 (4%) Strand=Plus/Minus Query 8665 GATGGCGTAGAGTTTGCTGTCAACAATACGTTTGTTGTTTGTGTCTACTGCGATTGTTGT 8724 ||||||||| | ||| | ||||||||| || | | || | ||| | || || Sbjct 1048 GATGGCGTATACTTTTCCGTCAACAATTTTCTTATCGAGCAGGTTGATTGCCACGGTAGT 989 Query 8725 TCCATCTGGTATCACGGGTTCCATGCTATCACCAGTAGCCGGAAAACAAAGCACACCAGA 8784 ||| || || || | ||||||||||| | ||| ||| || ||||| || |||| Sbjct 988 TCCTTCGGGAATGATTGGTTCCATGCTGTTCCCATGAGCAGGGAAACATAGAACAC---- 933 Query 8785 ACCATCACTGTTAGCTCCGACACGGCGCAAGGTTGCTTTTGAGAAGCGTAATTTAAAACC 8844 || | |||| || || || || || | || || || ||||| || || | || || Sbjct 932 TCCCTTTCTGT--GCGCCCACGCGCCGTAGTGTAGCCTTCGAGAATCGCAACATGAAGCC 875 Query 8845 ATTATGATCTTCG---CAATGAACTCTTCCGTCACCGCATGCAAACTCAATGTCTTTCAG 8901 |||| |||||| | || ||||| || |||||||| || | || || ||||| || Sbjct 874 GTTATAGTCTTCGTCTCCAT-AACTC--CCATCACCGCAGGCCAGTTCTATATCTTTTAG 818 Query 8902 ATATGGCACCTCAACTTCATCATCTCGTAGTGGTGTATTTCTGTCCCAAGTTTCAAGGGA 8961 | ||||||| || || |||||||| ||| |||||| | || ||||| | || | | Sbjct 817 AAATGGCACTTCCACCTCATCATCGGGTAACGGTGTACTGCTATCCCAGGCGTCTACAGT 758 Query 8962 ACCCCATTC 8970 ||||||||| Sbjct 757 ACCCCATTC 749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194435586392208