Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq465 116 3e-21 seq10591 111 1e-19 >seq465 Length=2116526 Score = 116 bits (128), Expect = 3e-21 Identities = 169/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 ||| |||| | ||| ||||||| || || ||| |||||| || || || || || | Sbjct 2111696 GCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGA 2111637 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGG 39175 || || || | || || ||||||||||| |||||||| |||||||||||||| ||||| Sbjct 2111636 GAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 2111577 Query 39176 GCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCA 39235 | | | ||| ||||| ||||| ||||| || | | || || || | ||| | Sbjct 2111576 G-ATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGA 2111518 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTACG 39291 | || | ||||| |||| ||||| || || || |||||||| ||||| ||| || Sbjct 2111517 CCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTTTGCG 2111462 >seq10591 Length=527945 Score = 111 bits (122), Expect = 1e-19 Identities = 166/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 ||| |||| | ||| ||||||| || || ||| |||||| || || || || || | Sbjct 132094 GCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTGTGGATGTTGTAGTCTGA 132153 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGG 39175 || || || | || || ||||||||||| |||||||| |||||||||||||| ||||| Sbjct 132154 GAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 132213 Query 39176 GCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCA 39235 | | | ||| ||||| ||||| ||||| || | | || || || | ||| | Sbjct 132214 G-ATACCCTCCTTGTCTTGAATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCGA 132272 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTT 39288 | || | ||||| |||| ||||| | || || |||||||| ||||| ||| Sbjct 132273 CCTCAAGGGTGATGGTTTTGCCCGTGTGGGTCTTTACAAAGATCTGCATGTTT 132325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428995748342216