Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq67205 176 1e-39 >seq67205 Length=1564 Score = 176 bits (194), Expect = 1e-39 Identities = 441/660 (67%), Gaps = 20/660 (3%) Strand=Plus/Minus Query 42441 GCGCTCGGC---CTCGGCTGCTTCGCGGGCAATGCGCTCCTCGCGCTCTTTCTGCTCGCG 42497 ||||| ||| |||||| ||||||||||| |||||||| || || || ||||| |||| Sbjct 1555 GCGCTGGGCGCGCTCGGCCGCTTCGCGGGCGATGCGCTCTTCACGTTCCTTCTGTGCGCG 1496 Query 42498 TGCTGCTGCTTCGGCGCGCAGGCGTTCCAGTTCGGCCTGCTCGGCTTCGAACTTCTCACG 42557 | ||| | |||| |||||||| ||||||||||||||||||| ||| ||||||| || Sbjct 1495 CTCGGCTTCAGCGGCACGCAGGCGCGCCAGTTCGGCCTGCTCGGCGTCGTACTTCTCGCG 1436 Query 42558 GGCAACCAGGGCTTC--TCGGAGAGCGATCAAAGCCTTAT-CTTTGGCGCGAGCAGCCTC 42614 || ||||||||| || | || ||| | | | ||| |||| ||||| Sbjct 1435 CGCCGCCAGGGCTTGCGTCAGGGA---ATCCTGGGCGCGGGCCTTGACGCGGTGCGCCTC 1379 Query 42615 TGCCTCGAACTCTTCCCAGGCTTCACTTATGGCCAGGCCTTCCAACCAAGCGATGTTGGC 42674 |||||| | || ||||||| || | ||| || | | | | ||||| | || Sbjct 1378 GGCCTCGTATTCCTCCCAGGACGCATCCACGGCGCGGGCATTGACCTGTTCGATGGTCGC 1319 Query 42675 TTTGAGTTCATTAGAGTCCAGATCGCGGCATTC--CAG-GCGAAGGTTTATCTTGTCGAT 42731 || || | ||||| |||||| || | | ||| ||| | | ||||| Sbjct 1318 GCGCAGCTCGGCCGCATCCAGGTCGCGGTTCTCGTCGGCGCGCAGGCGGAACCACTCGAT 1259 Query 42732 CTCGCCCTGATGACGCGCAACCCGCGCCGCTTCAGCCTCTTCCCACTCGGTCAACGGACT 42791 | ||| || ||| ||||| | || || ||||||||||||| | ||| Sbjct 1258 ACCCTGCTGGTGGCGCTGCTGGCGCGCTTCCTCGGCGGCTTCCCACTCGGTGAGCGGCGC 1199 Query 42792 GCGCAC---TTCGGCCTGCCAGGAATCCAACAGGTCGCGCATCCGCTTACGCTCGGCATC 42848 |||||| ||||||| | || |||| ||||||||| ||||| |||||||| || Sbjct 1198 GCGCACCTCTTCGGCCAG---GGCGTCCAGGGCGTCGCGCATGCGCTTGCGCTCGGCGTC 1142 Query 42849 GATCTTCTTCGGAACTTCCTTCAGCTCAGCGACCAATTCCTTGCCCACGTTGTCCAGCGC 42908 || ||| || || ||||||||||| |||||| || |||||||| | ||| ||||| Sbjct 1141 AATGCGCTTGGGCACATCCTTCAGCTCGTCGACCAGTTGCTTGCCCAGGGCGTCGAGCGC 1082 Query 42909 CGTCTTGGAGCGGGCG-ACCTTGTAGGCGATGGAAGCGATGGCATCGCGGCCCTTGCGGG 42967 | |||||| | ||| |||||| | || | | || |||| ||||||||||| | Sbjct 1081 GGCCTTGGA-CTTGCGCACCTTGAACGCCAGGCTGGCAGTGGCCTCGCGGCCCTTCTTCG 1023 Query 42968 TTGAAACGTCCGGCACGAAGCCGTCGATTTCCTCGCGAATCTTGGCCAGGAACGGGTCAA 43027 | | | |||||||||| ||| | || |||| |||||| | || | || || | Sbjct 1022 TCGTCATGTCCGGCACGTGGCCCGACACCTCGGCGCGGATCTTGTCGAGCCAGGGTTCCA 963 Query 43028 GGCCATTGGCTGCCGAGTAGACTTGCAGAGCGGTTTCTTTGGCTGGTACTTCGACCAGTT 43087 |||| || ||| || || | ||| |||||||| | || || | ||| | |||| Sbjct 962 GGCCGGAGGGCTTCGAATACACCTCCAGCGCGGTTTCCTGGGGCGGCAGTTCAGCAAGTT 903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156588450372080