Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03]
105,032 sequences; 2,977,074,946 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq10591 145 7e-30
seq465 145 7e-30
seq21443 129 5e-25
seq10379 100 3e-16
seq621 95.1 1e-14
>seq10591
Length=527945
Score = 145 bits (160), Expect = 7e-30
Identities = 173/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || || || |||||||| ||||| ||| ||| || || ||||| ||||| ||
Sbjct 132094 GCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTGTGGATGTTGTAGTCTGA 132153
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||| ||||| | || || ||||| |||||||| |||||||| ||||| ||||| | ||
Sbjct 132154 GAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 132213
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCA 41813
| | ||||||||| ||| |||| |||| ||| || | |||| || | ||| |
Sbjct 132214 GATACCCTCCTTGTCT-TGAATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCGA 132272
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||| | || || ||||| ||||| | |||||||| || |||||||||||
Sbjct 132273 CCTCAAGGGTGATGGTTTTGCCCGTGTGGGTCTTTACAAAGATCTGCATGTT 132324
>seq465
Length=2116526
Score = 145 bits (160), Expect = 7e-30
Identities = 173/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || || || |||||||| ||||| ||| ||| ||||| ||||| ||||| ||
Sbjct 2111696 GCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGA 2111637
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||| ||||| | || || ||||| |||||||| |||||||| ||||| ||||| | ||
Sbjct 2111636 GAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 2111577
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCA 41813
| | ||||||||| ||| |||| |||| || || | |||| || | ||| |
Sbjct 2111576 GATACCCTCCTTGTCT-TGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGA 2111518
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||| | || || ||||| ||||| || ||||| || || |||||||||||
Sbjct 2111517 CCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTT 2111466
>seq21443
Length=656158
Score = 129 bits (142), Expect = 5e-25
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | ||||| ||||| || ||||||||| ||||| ||||| || || |||||
Sbjct 30104 AGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGG 30163
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || ||||||||||| || || || || | ||| ||||| | ||||| || |||
Sbjct 30164 CCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCC 30223
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824
|| ||| |||||| ||||| | ||||| || | ||||||||||| ||
Sbjct 30224 TTATCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 30283
Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| || || || ||||| ||||| ||||| |||||||| ||
Sbjct 30284 ATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 30324
>seq10379
Length=4916278
Score = 100 bits (110), Expect = 3e-16
Identities = 157/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
|| || |||||||| ||||| ||| ||| ||||| ||||| ||||| ||||| |||||
Sbjct 1637655 AGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGG 1637596
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || |||| ||||| || |||||||| ||| ||||| | || | | ||||
Sbjct 1637595 CCATCTTCCAGCTAATTGCCAGCAAATATCAGATGCTACTGGTCAGGTGGGATACCCTCC 1637536
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGT 41823
|||| ||| ||| |||| | || | |||| || | ||| ||||| | |
Sbjct 1637535 TTGTGT-TGAACTTTGGCTTTGTCATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGG 1637477
Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| ||||| || || || ||||| || || |||||||||||
Sbjct 1637476 GATGGTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCATGTT 1637435
>seq621
Length=1137327
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| |||| ||| || || || ||||| ||||| ||||| ||| | | || ||
Sbjct 429901 ACCAGGTGCATGGTGGACTGTTTTTGGATGTTGTAGTCTGAGAGAGTGAGGCCATCCTCC 429960
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||||||||| || |||||||| ||||| ||||| | || | | |||||||| | ||
Sbjct 429961 AGCTGCTTGCCAGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGT-CTTG 430019
Query 41774 ATTTTTTGCTTCAACGACGACACA---GTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830
| |||| |||| | | | || |||| || | ||| ||||| | || || ||
Sbjct 430020 AATTTTGGCTTTGA--AATTCTCAGTGGTGTAACTGGGCTCGACCTCAAGGGTGATGGTC 430077
Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| ||||| || ||||| || || | ||||||
Sbjct 430078 TTGCCCGTGAGGGTCTTCACAAAGAGCTGCAT 430109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 461697041078400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |