Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq9420 264 1e-65 seq44056 165 8e-36 seq21918 149 6e-31 seq42152 145 8e-30 seq68558 134 1e-26 seq41127 132 5e-26 seq83510 127 2e-24 seq8680 120 3e-22 seq37440 118 1e-21 seq44178 116 4e-21 seq43203 107 2e-18 seq14302 107 2e-18 seq37045 105 7e-18 seq43608 100 3e-16 seq1057 96.9 4e-15 seq44205 95.1 1e-14 seq43757 95.1 1e-14 seq44132 87.8 2e-12 seq112392 82.4 8e-11 seq44310 82.4 8e-11 >seq9420 Length=356144 Score = 264 bits (292), Expect = 1e-65 Identities = 541/796 (68%), Gaps = 16/796 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| | || ||| || | || || || || ||||||| | |||| || Sbjct 53500 GAGCCGCTGCTGAGAGAAAACTCCTGGCGCTTTGTCATCTTCCCCACCGAGTACCATGAT 53441 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| || ||||| || || || |||||||||| |||||||||||||||| Sbjct 53440 ATCTGGCAGATGTATAAGAAGGCGGAAGCTTCCTTCTGGACCGCCGAGGAGGTGGACCTG 53381 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 |||||||||| | ||||||| | |||| ||| ||| | |||| || || Sbjct 53380 TCCAAGGACATTTGGCACTGGGAATCCCTGAAGCCCAAGGAGAGAGATTTTATATCCCAT 53321 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-TTT 116814 || |||| || || || || || || ||||| || || || || |||| ||||| ||| Sbjct 53320 GTTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCGATTT 53261 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 || || || || ||| || | || || || || |||| ||||| || || ||||| || Sbjct 53260 AGC-CAAGAAGTTCAGATGACAGAAGCCCGCTGTTTCTGTGGCTTCCAAATTGCCATAGA 53202 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTCGG 116930 |||| | || || ||||||||| ||| || ||||| ||| | | | | | Sbjct 53201 GAACATACATTCTGAAATGTATAGTTTCCTTATTGACACTTACATAAAAGATCCCAAAGA 53142 Query 116931 AGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCG 116990 | | ||| || | | || |||| || |||||||| || ||||| ||||||| | Sbjct 53141 AAGGGAATTTC----TCCTCAATGCCACTGAAACGATGCCTTGTGTCAAGAAGAAGGCAG 53086 Query 116991 AGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCT 117050 | ||||| ||| |||||| | | || ||| || ||| || || || | || | || Sbjct 53085 ATTGGGCCTTGCACTGGATTGGGGACAAAGAAGCTACCTATGGTGAACGTGTTGTAGTCT 53026 Query 117051 TCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGA 117110 | || || | || || | ||||||| || ||| || | ||||| |||||||||| Sbjct 53025 TTGCTGCAGCGGAAGG---CATCTTTTCTGGTTATTTTGCATCGATATTCTGGCTCAAGA 52969 Query 117111 AACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTC 117170 |||| || || ||||| ||||| || || ||| || || || ||| || |||||| Sbjct 52968 AACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGAGATGAGGGTT 52909 Query 117171 TGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGC 117230 | || || || ||||| || || ||||||| || |||| || ||| | | | Sbjct 52908 TACACTGTGATTTTGCTTGCCTGATGTTCAAACACCTGGTACACAAACCACTGGAGTAGA 52849 Query 117231 GCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGC 117290 | || || || || | | | | || || || || ||| |||||||| || || Sbjct 52848 GAGTAAGAGAAATAATTATCAATGCTGTTCGGATAGAACAGGAATTCCTCACTGAGGCCT 52789 Query 117291 TGCCGGTG-CGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTC 117349 |||| ||| | || ||||| | |||||| ||| ||||||||| ||||| || Sbjct 52788 TGCCTGTGAAGCCTATTGGGA-TGAATTGCACTCTAATGAAGCAATACATTGAGTTTGTG 52730 Query 117350 GCCGACAGGC-TGCTG 117364 || ||||| | ||||| Sbjct 52729 GCAGACAGACATGCTG 52714 >seq44056 Length=626226 Score = 165 bits (182), Expect = 8e-36 Identities = 178/233 (76%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || || ||||| || | ||||||||||||||||||| | || ||||| | Sbjct 245017 AAACATGCAGATCTTTGTAAAGACCCACACGGGCAAAACCATCACCCTTGAGGTCGAGCC 244958 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || |||| | | | |||| |||| | ||||||| ||||| ||||| ||||| | | Sbjct 244957 CAGTGACACCATTGAGAACG-TCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTG 244899 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || || || | || |||||||||||||| || | ||||| ||| |||| Sbjct 244898 ACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCTCAGACT 244839 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||| || ||| |||| ||||| || ||||||||| || | || ||| Sbjct 244838 ACAACATCCACAAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGCGAGGTGGC 244786 >seq21918 Length=9848887 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| |||| ||||| ||| | Sbjct 7768207 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGC 7768148 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | || || || |||||||| | |||||| Sbjct 7768147 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGCATCCCTCCTGACCAG 7768088 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || ||||||||||| || | |||||||| ||||||||| Sbjct 7768087 CAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 7768028 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| ||| |||| ||||| | || ||||||||||||| || Sbjct 7768027 ATCCAGAAAGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGGGG 7767981 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| |||| ||||| ||| Sbjct 7768663 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 7768604 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | ||||| ||||||||||| | |||||| Sbjct 7768603 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCAG 7768544 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || || |||||||| || | ||||||||| ||||||||| Sbjct 7768543 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 7768484 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||| ||| |||| ||||| || ||| Sbjct 7768483 ATCCAGAAAGAGTCCACCCTGCACCTGGTG 7768454 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| |||| ||||| ||| Sbjct 7768435 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 7768376 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | ||||| || ||||| || | |||||| Sbjct 7768375 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCTCCTGACCAG 7768316 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || || |||||||| || | ||||||||| ||||||||| Sbjct 7768315 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 7768256 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||| ||| |||| ||||| || ||| Sbjct 7768255 ATCCAGAAAGAGTCCACCCTGCACCTGGTG 7768226 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| |||| ||||| ||| Sbjct 7768891 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 7768832 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | || || || ||||| || | |||||| Sbjct 7768831 GACACCATCGAGAATGTCAAGGCAAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCAG 7768772 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || || |||||||| || | ||||||||| ||||||||| Sbjct 7768771 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 7768712 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||| ||| |||| ||||| || ||| Sbjct 7768711 ATCCAGAAAGAGTCCACCCTGCACCTGGTG 7768682 Score = 123 bits (136), Expect = 3e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || || || ||||| ||||||||| | || || || ||| Sbjct 7769120 AATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAG 7769061 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||||| ||| || | || || ||||||||||| | ||||| Sbjct 7769060 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGATAAGGAGGGCATCCCTCCTGACCA 7769001 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || || |||||||| || | |||||||| |||||||| Sbjct 7769000 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAA 7768941 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||| ||| |||| |||| || ||| Sbjct 7768940 CATCCAGAAAGAGTCCACCTTGCACCTGGTG 7768910 >seq42152 Length=979470 Score = 145 bits (160), Expect = 8e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || || || ||| Sbjct 315512 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 315453 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || || | || ||||| ||||||||| | |||||| Sbjct 315452 GACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCCCCCCGACCAG 315393 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | ||||| || ||||||||| Sbjct 315392 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 315333 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| | || ||||| || || ||||| ||||||| ||| Sbjct 315332 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGCCTGAGGGGTGGC 315285 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| || || || || ||||| ||||||||| | || || || || Sbjct 315971 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTGGAGCCC 315912 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | ||| | |||| ||||| | || || || ||||| ||| | ||| Sbjct 315911 AGTGACACCATCGAAAATGTGAAGGCCAAAATCCAGGATAAGGAAGGCATTCCCCCCGAC 315852 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || ||||| |||||||| || | ||||| || |||||| Sbjct 315851 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 315792 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||| | || ||||| || || |||| |||| || || Sbjct 315791 AACATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGAGGTGG 315742 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || |||||| | || || || ||| Sbjct 315740 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACTATCACCCTGGAGGTGGAGCCCAGT 315681 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| ||||| | || || || ||||| ||| | |||||| Sbjct 315680 GACACCATCGAAAATGTGAAGGCCAAAATCCAGGATAAGGAAGGCATTCCCCCCGACCAG 315621 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | ||||| || ||||||||| Sbjct 315620 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 315561 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || ||||| || || |||| |||| || || Sbjct 315560 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGAGGTGG 315514 >seq68558 Length=238 Score = 134 bits (148), Expect = 1e-26 Identities = 149/196 (76%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||||||||| ||||||||| | || || || | || Sbjct 44 ATGCAGATCTTCGTCAAAACCCTCACGGGCAAGACCATCACCCTAGAGGTGGAGAGCTCC 103 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || || || ||| |||| || Sbjct 104 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCCCCGGATCA 162 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || || |||||||| |||| || ||||| ||||||||| Sbjct 163 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGTACCCTAGCCGACTACAA 222 Query 40869 CATCCAGAAGGAGGCC 40884 ||||||||||||| || Sbjct 223 CATCCAGAAGGAGTCC 238 >seq41127 Length=7874669 Score = 132 bits (146), Expect = 5e-26 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || || || || || ||||| |||||||||||| || | || ||||| | Sbjct 7358032 AAACATGCAGATCTTTGTGAAGACCCTCACAGGCAAAACCATCCCCCTTGAGGTCGAGCC 7357973 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 || |||| | | | | ||| | ||| ||| |||| ||||| ||||| | || Sbjct 7357972 CAGTGACACCATTGAGAATGACAAAGCCAAAGTTCAACACAAGGAGGGTATCCCACCTGA 7357913 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||| | | || || | || |||||||||||||| || | ||||| ||| ||||| Sbjct 7357912 CCAGTAGCATCTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGCACTCTCTCAGACTA 7357853 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTG 40908 |||||||||||| ||| |||| ||||| || ||||||||| || Sbjct 7357852 CAACATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCGCCTG 7357810 >seq83510 Length=277 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| || ||||| || ||||||||| | || ||||| | Sbjct 3 AAGATGCAGATCTTCGTGAAAACCCTGACGGGGAAGACCATCACCCTTGAGGTCGAGCCT 62 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||| | | ||| | |||| || || | ||||| || || || || | ||| Sbjct 63 TCCGATACTATTGAAAATGTGAAGGCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGAC 122 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| ||||| |||| || ||||| ||||| || || | ||||||||| |||||| Sbjct 123 CAGCAGCGACTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCTGACTAC 182 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||| ||| |||| || || || ||| |||| Sbjct 183 AACATCCAGAAAGAGTCCACCCTTCACCTGGTGCTGCG 220 >seq8680 Length=483526 Score = 120 bits (132), Expect = 3e-22 Identities = 157/215 (73%), Gaps = 7/215 (3%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || | ||||||| |||| ||||| ||| Sbjct 315965 ATGCAGATCTTTGTGAAGACCCTCACAGGTAAGATCATCACCCTCGAGGTCGAGCCCAGT 316024 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| |||||| ||||||| ||||| ||||||||||| ||||| Sbjct 316025 GACACCACTGAGAACG-TCAAGGCCAAAATTCAAGACAAGGAGGGCATCCCACTTGACCA 316083 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||||||||||||||||| ||||| || |||| ||| Sbjct 316084 GCAGCGTCTGATATTTGCGGGCAAACAGCTGGA-----GCCGCACTCTTTCAGACTGCAA 316138 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGC 40903 ||||||||| ||| ||| ||||| || | | ||| Sbjct 316139 CATCCAGAAAGAGTCCAACCTGCACCTGGGGCTGC 316173 >seq37440 Length=3232823 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || |||| |||||| ||||||||| | || || || ||||| Sbjct 1723320 ATGCAGATCTTTGTGAACACCCTCATGGGCAAGACCATCACCCTTGAGGTGGAGGCCACT 1723379 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | |||| | |||| | ||||| |||||||||| | ||||| Sbjct 1723380 GACACCACTGAGAATG-TCAAAGCCGAAATCCAAGACAAGGAGGGCATCCTGCCTGACCA 1723438 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | ||||||||||||| ||| || | ||| ||| ||||| || Sbjct 1723439 GCAGTGTCTGATATTTGCGGGCAAACAGCCGGAGGATGGCTGCAGTCTCTCAGACTAGAA 1723498 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||| | ||| |||| ||||| || ||| |||| || | || ||| Sbjct 1723499 CATCCAGGAAGAGTCCACCCTGCACCTGGTGCTGCGTCTGTGAGGTGGC 1723547 >seq44178 Length=3241816 Score = 116 bits (128), Expect = 4e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || || || || || ||||||||||||||||||||| | || ||||| | Sbjct 924714 AAACATGCAGATCTTTGTGAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTCGAGCC 924655 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 || |||| | | | | |||| | ||||||| ||||| ||||| ||||| | || Sbjct 924654 CAGTGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGA 924595 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || || || | || |||||||||||||| || | ||||| ||| ||||| Sbjct 924594 CCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCTCAGACTA 924535 Query 40866 CA 40867 || Sbjct 924534 CA 924533 >seq43203 Length=1387722 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | || || || || ||||||||||| ||||||||| | || ||||| ||| Sbjct 881810 ATGCAGCTCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 881751 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | | |||| | ||||||| ||||| ||||| ||||| | |||||| Sbjct 881750 TACACCACTGAGAATTTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAG 881691 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | || ||||| |||||||| || | | ||| ||| ||||||||| Sbjct 881690 CAGCGTCTGATATTTGCTGGCAAGCAGCTGGAGGATGGCCTCACTCTCTCAGACTACAAC 881631 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| || || |||| |||| || || Sbjct 881630 ATCCAAAAACAGTCCACCATGCACCTGGT 881602 >seq14302 Length=3283093 Score = 107 bits (118), Expect = 2e-18 Identities = 157/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | || || || || ||||| ||||| ||| | || ||||| ||| Sbjct 1062269 ATGCAGACCTTTGTGAAGACCCTCACAGGCAAGACCTTT------GAGGTCGAGCCCAGT 1062322 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | |||| | ||||||| ||||| ||||||||||| | ||||| Sbjct 1062323 GACACCACTGAGAATG-TCAACGCTAAAATTCAAGACAAGGAGGGCATCCCACCTGACCA 1062381 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || ||||||||||||||||| || | |||| ||| |||||||| Sbjct 1062382 GCAGCATCTGATACTTGCGGGCAAACAGCTGGAGGATGGCTGCACTCTCTCAGACTACAA 1062441 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTG 40908 ||||||||| || |||| ||||| || ||| ||||| || Sbjct 1062442 CATCCAGAAAGAATCCACTCTGCACCTGGTGCTGCGCCTG 1062481 >seq37045 Length=3135053 Score = 105 bits (116), Expect = 7e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 || ||||||||| | || ||||||||||| || || || |||||||| | |||| ||| Sbjct 1582750 GAACCGCTGCTGAGAGAAAACCCCCGCCGCTTTGTCATCTTCCCCATCGAGTACCATGAC 1582691 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 || |||| ||||| || ||||| ||||| || |||||||||| ||||||||| Sbjct 1582690 ATCTGGCAGATGTATAAGAAGGCGGAGGCTTCCTTCTGGACCGCCGAGGAGGT 1582638 >seq43608 Length=2410137 Score = 100 bits (110), Expect = 3e-16 Identities = 159/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGC 40755 || || || || || ||||| ||||| |||||| || | || ||||| ||| || | Sbjct 2063576 ATCTTTGTGAAGACCCTCACAGGCAAGACCATCGCCCTTGAGGTCGAGCCCAGTGATGCC 2063517 Query 40756 G-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACG 40814 || || || ||| | ||||||| ||||| ||||||||| | |||||||| | Sbjct 2063516 ACTGAGAATGC-CAAAGCCAAAATTCAGGACAAGTAGGGCATCCTACCTGACCAGCAGTG 2063458 Query 40815 ACTCATC-TACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCC 40873 || || | | ||||||||||||| | || | ||||| ||| ||||||||||||| Sbjct 2063457 TCTGATAATTTGAGGGCAAACAGCTGCAGGATGGCCGCACTCTCTCAGACTACAACATCC 2063398 Query 40874 AGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||| ||| |||| ||||| || || || || || | || ||| Sbjct 2063397 AGAAAGAGTCCACCCTGCACCTGATGCTGTGCCTGCGAGGTGGC 2063354 >seq1057 Length=1145873 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||| |||| | ||||| || || || || | ||| ||||||||| | || || || || Sbjct 555235 AAAGTGCAGGTCTTCGTGAAGACCCTGACTGACAAGACCATCACCCTTGATGTGGAGCCC 555176 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | ||| | |||| || |||| || || || |||||| | | || Sbjct 555175 AGTGACACCATCGAAAATGTGAAGGCCAATATTCAGGATAAGGAAGGCATCTTCCCCAAC 555116 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || |||| |||||||| || | ||||| || |||||| Sbjct 555115 CAGCAGAGGCTCATCTTTGCAGGCATGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 555056 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||| || | || ||||| || || ||| |||| || ||| Sbjct 555055 AACATCCAGAAAGAATCGACCCTGCACCTGGTCCAGCGTCTGAGAGGTGGC 555005 >seq44205 Length=952818 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || |||| || ||| ||||||||| | || |||| ||| Sbjct 63523 ATGCAGATCTTTGTGAAGACCCTCATGGACAAGACCATCACCCTTGAGATCGAGCCCAGT 63582 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGA-GGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||||||| ||||| || ||| ||||| | |||| Sbjct 63583 GACACTATTTAGAATGTCAAAGCCAAAATTCAAGACAAGGAAGGGTATCCCACCTAACCA 63642 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | || ||||||||||| || | ||||| ||| | |||||| Sbjct 63643 GCAGCGTCTGATACTTTCTGGGAAACAGCTGGAGGATGGCCGCACTCTCTCAGGCTACAA 63702 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||| ||| |||| || | || ||| || || || | || ||| Sbjct 63703 CATCCAGAAAGAGTCCACCCTAAACCTGGTGCTGTGCCTGCGAGGTGGC 63751 >seq43757 Length=1313749 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || | ||||| || ||||| || | |||||||||| | || || | ||| Sbjct 962835 ATGCAGATCTCTGTAAAGACCCTCACAGGAAGAACCATCACCTTTGAGTTCCAGCCCAGT 962776 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| || || ||| | |||| | || || | ||||| |||||||||| | ||||| Sbjct 962775 GACACCGGTGAAAATG-TCAAAGCCAAGATCCATGACAAGGAGGGCATCCTACCTGACCA 962717 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | | |||||||||| |||| || | | ||| || || || || Sbjct 962716 GCAGCATCTGATATTTGTGGGCAAACAGTTGGAGGATGGCCACACTCTTTCAGATTATAA 962657 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||| ||| |||| ||||| Sbjct 962656 CATCCAGAAAGAGTCCACCCTGCA 962633 >seq44132 Length=1831039 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/231 (70%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || |||||||| |||||||| | || ||| | ||| Sbjct 647271 ATGCAGATCTTTGTGAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCAAGCCCAGT 647330 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || | | |||| | ||||||| ||||| ||||| ||||| | ||||| Sbjct 647331 GACACCAATGAGGATG-TCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCA 647389 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTAC 40866 ||| | || || || ||||||||||||| || | || | || ||| |||||| Sbjct 647390 GCAGCATCTGATACTTGCCGGCAAACAGCTGGGGGATGGCAG-GAACTCTCTCAGACTAC 647448 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||| ||| || |||| ||||| || || ||||| || | || ||| Sbjct 647449 GACATCTGGAAACAGTCCACCCTGCACCTGATGCTGCGCCTGCGAGGTGGC 647499 >seq112392 Length=498 Score = 82.4 bits (90), Expect = 8e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 40767 CAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGC 40826 ||||| ||| || | ||||| || || ||||| | |||||||| | || |||| || Sbjct 498 CAAGGCAAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAGCAGAGGCTTATCTTTGC 439 Query 40827 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCAC 40886 || || ||||| || || | || ||||| |||||||||||||||||||| |||| Sbjct 438 TGGTAAGCAGCTCGAGGATGGACGTACCCTTGCAGACTACAACATCCAGAAGGAATCCAC 379 Query 40887 GCTGCATCTAGTGTTGCG 40904 || || || ||| |||| Sbjct 378 CCTTCACCTCGTGCTGCG 361 >seq44310 Length=1037435 Score = 82.4 bits (90), Expect = 8e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||| | ||||| || | ||||| ||| || || | || || || || Sbjct 356650 AAAATGCAAATCTTCCTGAAAACCCTGCCCGGCAAGACCGTCTCCCTGGAGGTGGAGCCC 356709 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCAT-CCCCGCGGA 40805 | |||| | | |||| | |||| || || | || ||||| ||||| |||| | || Sbjct 356710 AGTGACATCCTCCAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCACTGA 356769 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | || ||| | ||||| ||||| || || | |||| || ||||| Sbjct 356770 CCAGCAGAGTCTTGTCTTTGTAGGCAAGCAGCTAGAAGATGGCTGCACTCTTTCTGACTA 356829 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||| |||| ||| | | ||||| || Sbjct 356830 CAACATTCAGAGAGAGTCAGCCCTGCACCT 356859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514346470197120