Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq36884 91.5 9e-14 >seq36884 Length=899181 Score = 91.5 bits (100), Expect = 9e-14 Identities = 156/225 (69%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 33157 CAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC 33216 |||||| ||||| | || ||||||||||| |||||||| ||||||||| | || || Sbjct 628426 CAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 628485 Query 33217 ATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT--- 33273 |||| |||||| ||| ||| || | | ||||| | | || || ||||| || Sbjct 628486 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGACCAGGAGGAATTCCTTCCTTAAC 628545 Query 33274 TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333 | | | | ||| | ||| ||| || ||||| ||||| ||| || || || || Sbjct 628546 CTGGATCTTGGCC---TATACATTTTCTATTGTGTCTGAGGGTTCAACCTCGAGGGTGAT 628602 Query 33334 CGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTATGGT 33378 || || || ||||| ||| | |||||||| ||||| || |||| Sbjct 628603 GGTCTTCCCTGTAAGGGTTATCACGAAAATCTGCATTTTGGTGGT 628647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318251122057776