Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq11758 109 5e-19
>seq11758
Length=1720543
Score = 109 bits (120), Expect = 5e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230
|| |||||||| ||||||||||||| ||||| ||||| || ||||| ||||| || ||
Sbjct 1620490 GGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGATGCCCCAAGCT 1620431
Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290
|| || |||| || ||||| || || || || || |||||||| || || ||||||||
Sbjct 1620430 GAGAACCACGACCCAGACATCAAGGAGCATGTGAACTCCCTGGGGGAGAATCTGAAGACC 1620371
Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313
| || || | ||||| |||||
Sbjct 1620370 CTCAGGCTGAGGCTGCGGCGCTG 1620348
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438
|||| || || | |||||| ||||| |||||||||||||||||||| |||||||||||||
Sbjct 1618121 AGCTCCAAGAGAAAGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 1618062
Query 127439 TCGAGACTTACATG 127452
| || | ||||||
Sbjct 1618061 TAGAAGCCTACATG 1618048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429344142580544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |