Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq43609 109 4e-19
>seq43609
Length=3422226
Score = 109 bits (120), Expect = 4e-19
Identities = 127/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832
||| || |||| ||||| || |||| |||||||||||| || || || || || | |||
Sbjct 1886926 CATATCTCTGTATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGACCCAAGTC 1886867
Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCT-TATCCAAAAAGTCTCTGGAACCATTGGCGT 25891
|| ||||| ||| || | | |||| | ||||||||||||| ||| |||||||| |
Sbjct 1886866 CCCTTCTTCTCTG-GCGGAGAACCCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCAT 1886808
Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940
||||||| || || ||||| || |||||||| | |||||||| ||
Sbjct 1886807 CCCAGATTTTCACTCCCTTGGAAGACAGCTCTTTAGCATTTGTGGATCC 1886759
Score = 91.5 bits (100), Expect = 1e-13
Identities = 111/150 (74%), Gaps = 1/150 (1%)
Strand=Plus/Minus
Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565
|| |||||||||||||| || ||||||||||||||| || || || || | ||||||
Sbjct 1891068 GCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCACACCTAGGCCCATG 1891009
Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625
| | ||||| |||||||| ||||| || || ||||| || ||| || ||||| ||
Sbjct 1891008 T-CTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACCACATAGAACTGGCA 1890950
Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655
| || | ||| ||||| || || || ||
Sbjct 1890949 GAGGGCATGGCATGGAGGCAGTGCCATCAG 1890920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 339575844896376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |