Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq9420 98.7 3e-15
seq19734 96.9 9e-15
>seq9420
Length=356144
Score = 98.7 bits (108), Expect = 3e-15
Identities = 152/213 (71%), Gaps = 8/213 (4%)
Strand=Plus/Minus
Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAA 22491
||||| |||||||||||||| || | ||||| | |||| ||| | | | | |||
Sbjct 53098 AAGAAGAAGGCAGATTGGGCCTTGCACTGGATTGGGGACAAAGAAGCTACCTATGGTGAA 53039
Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTG-CAAT 22550
||| || | | ||||||| | |||||||| ||||||||| |||||| | ||
Sbjct 53038 CGTGTTGTAGTCTTTGCTGCAGCGGAAGGCAT---CTTTTCTGGTT-ATTTTGCATCGAT 52983
Query 22551 CTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAG 22610
|| ||||| || ||||| | | | ||||| || || || ||||| ||||| | |||||
Sbjct 52982 ATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAG 52923
Query 22611 CCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643
| ||||||||||| | || |||||||| ||
Sbjct 52922 CAGAGATGAGGGTTTACACTGTGATTTTGCTTG 52890
>seq19734
Length=6466590
Score = 96.9 bits (106), Expect = 9e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || || | || ||||| || || ||||||
Sbjct 5926159 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAAACAGAAACAGGCACCCCGTATATG 5926218
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||||||||| || || || ||| |||||||||| |||| || || || |
Sbjct 5926219 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGC 5926278
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| || || || || | || ||||||
Sbjct 5926279 AGCAACCTGTGCACAGAAATAGTGGAGTACACC 5926311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1301090655570384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |