Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq23478 141 6e-29 seq40917 131 1e-25 seq35371 131 1e-25 seq44287 127 1e-24 seq42234 127 1e-24 seq41393 127 1e-24 seq38050 122 6e-23 seq34465 122 6e-23 seq42510 120 2e-22 seq39797 120 2e-22 seq33539 120 2e-22 seq30130 118 7e-22 seq44074 114 9e-21 seq35564 114 9e-21 seq111985 113 3e-20 seq44421 113 3e-20 seq43816 113 3e-20 seq27374 109 4e-19 seq56308 104 2e-17 seq37736 104 2e-17 seq40450 102 5e-17 seq21477 102 5e-17 seq42152 98.7 7e-16 seq32227 98.7 7e-16 seq17706 98.7 7e-16 seq44363 96.9 2e-15 seq38975 96.9 2e-15 seq89883 95.1 8e-15 seq83510 93.3 3e-14 seq36884 93.3 3e-14 seq35270 91.5 1e-13 seq97443 89.7 3e-13 seq43693 87.8 1e-12 seq20174 87.8 1e-12 >seq23478 Length=255467 Score = 141 bits (156), Expect = 6e-29 Identities = 213/301 (71%), Gaps = 4/301 (1%) Strand=Plus/Plus Query 6189 GTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTA 6246 ||| | ||| |||||| |||||||| ||||| || |||| |||||||||||||| | Sbjct 126656 GTGTCAGACCAGTTCTATCGCTACAAGATGCCCCG--TCTGATTGCCAAGGTCGAGGGCA 126713 Query 6247 AGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGAC 6306 | ||||| || || || || || || ||||||| | ||| || || |||||||| | Sbjct 126714 AAGGAAATGGAATCAAGACAGTTATAGTCAACACGGTTGATGTTGCAAAGGCGCTTAATC 126773 Query 6307 GCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTG 6366 | ||| | || || || || |||||||| || || || || || || ||||| ||||||| Sbjct 126774 GGCCTCCAACGTATCCCACCAAATATTTTGGTTGTGAGCTGGGAGCACAGACCCAGTTTG 126833 Query 6367 ATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACT 6426 || || || || || | ||| || || ||||| ||| | |||||||| ||| Sbjct 126834 ATGTTAAGAATGACCGTTACATTGTCAATGGATCTCATGAGGTGAATAAGCTGCAAGACA 126893 Query 6427 TACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486 | | || || || ||| || ||||| || |||| ||||| || || || || || | Sbjct 126894 TGTTGGATGGATTCATTAAAAAATTTGTTCTCTGTCCTGAATGTGAGAATCCTGAAACAG 126953 Query 6487 A 6487 | Sbjct 126954 A 126954 >seq40917 Length=733 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct 449 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGGTAGGGACAGTGGGAATCTCGT 508 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 509 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 543 >seq35371 Length=2334 Score = 131 bits (144), Expect = 1e-25 Identities = 75/77 (97%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 983 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 924 Query 20007 GGTAATATTTAGCCTTA 20023 ||| ||||||||||||| Sbjct 923 GGTCATATTTAGCCTTA 907 Score = 111 bits (122), Expect = 1e-19 Identities = 63/64 (98%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 19960 GTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGC 20019 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 612 GTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTCATATTTAGC 553 Query 20020 CTTA 20023 |||| Sbjct 552 CTTA 549 >seq44287 Length=2052047 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 745420 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 745361 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 745360 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 745326 >seq42234 Length=2099890 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 1414680 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 1414739 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 1414740 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 1414774 >seq41393 Length=2893867 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 2237999 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 2237940 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 2237939 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 2237905 >seq38050 Length=1362186 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| |||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 1014094 AAGCCCCTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 1014035 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 1014034 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 1014000 >seq34465 Length=1024626 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| ||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 452184 AAGCCTGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 452125 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 452124 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 452090 >seq42510 Length=1301382 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | ||||||||| |||||||||||||||||| ||||||||| |||| | || Sbjct 87139 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 87198 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | ||| ||||| | || | ||||| || || Sbjct 87199 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 87258 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | ||||| |||||| || | || || || Sbjct 87259 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 87318 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||||| | |||||||||||| |||||||| || Sbjct 87319 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 87354 >seq39797 Length=2305578 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | ||||||||| |||||||||||||||||| ||||||||| |||| | || Sbjct 1757138 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 1757079 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | ||| ||||| | || | ||||| || || Sbjct 1757078 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1757019 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | ||||| |||||| || | || || || Sbjct 1757018 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 1756959 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||||| | |||||||||||| |||||||| || Sbjct 1756958 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 1756923 >seq33539 Length=658333 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | ||||||||| |||||||||||||||||| ||||||||| |||| | || Sbjct 236610 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 236669 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | ||| ||||| | || | ||||| || || Sbjct 236670 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 236729 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | |||||| |||||| || | || || || Sbjct 236730 CTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACCTCGAGGGTGATGGT 236789 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || | |||||||||||| |||||||| || Sbjct 236790 CTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 236825 >seq30130 Length=32052 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| Sbjct 189 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGTATCTCGT 248 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||| |||||||||||||||||||| Sbjct 249 TCATCCATTCATGCACGTCACTAATTAGATGACGA 283 >seq44074 Length=2336235 Score = 114 bits (126), Expect = 9e-21 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||| | | ||||||||| |||||||||||||||||| ||||||||| | || | || Sbjct 1652740 CAACGCAAGATGAAGAGTAGACTCCTTTTGAATATTGTACTCAGACAAAGTATGTCCATC 1652799 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | ||| ||||| | || | ||||| || || Sbjct 1652800 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1652859 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | |||||| |||||| || | || || || Sbjct 1652860 CTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGAGTTCAACCTCGAGAGTGATGGT 1652919 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||||| | |||||||||||| |||||||| || Sbjct 1652920 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 1652955 >seq35564 Length=4126874 Score = 114 bits (126), Expect = 9e-21 Identities = 81/93 (87%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||| |||||||||||||||||||||| |||||||| ||||| || ||||||||| Sbjct 1323992 GCCCATTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTC 1324051 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||| ||||||| Sbjct 1324052 ATCCATTCATGCGCGTCACTAATTATATGACGA 1324084 >seq111985 Length=492 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 242 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGGACTCGT 301 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 302 GTCAGTATTTAGCCTTA 318 >seq44421 Length=1921801 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| ||||||||||||||||||| ||| |||||||||||||| || ||||| || Sbjct 184692 AAGCCAGTTCCCTTGGCTGTGGTTTTGCTGGATAGTAGATAGGGACAGTGGGAATCTTGT 184633 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||||| |||||||||||||||||| Sbjct 184632 TTATCCATTCATGCGCATCACTAATTAGATGACGA 184598 >seq43816 Length=2639163 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||| | Sbjct 2626278 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCAT 2626219 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||| || ||||||||||||||||||| Sbjct 2626218 TCATCCATTCATTCGTGTCACTAATTAGATGACGA 2626184 >seq27374 Length=19398 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| |||||||| ||||||||||||| |||||||| |||| || |||||||| Sbjct 17739 AAGCCCATTCCCTTGTCTGTGGTTTCGCTGGATAGTAGGAAGGGACAGTGGGAATCTCGT 17680 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||||| |||||||||||||||||| Sbjct 17679 TCATCCATTCATGCGCATCACTAATTAGATGACGA 17645 >seq56308 Length=216 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 140 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTCTCGT 81 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 80 GCCGGTATTTAGCCTTA 64 >seq37736 Length=4050798 Score = 104 bits (114), Expect = 2e-17 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||| ||| |||||||| ||||| || ||||||| Sbjct 346636 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGC 346577 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||| | ||||||||||||||| || Sbjct 346576 TCATCCATTCATGCACATCACTAATTAGATGATGA 346542 >seq40450 Length=975263 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 ||||| | ||||||||| |||||||||||| ||| | ||||||||| |||| | || Sbjct 15904 CAACAAAAGATGAAGAGTAGGCTCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCCATC 15963 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| | || ||||| || || | ||| ||||| | || | ||||| || || Sbjct 15964 TTCCAGTTGCTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 16023 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | |||||| |||||| || | || ||||| Sbjct 16024 CTGGATCTTGGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAACCTCAAGGGTGATAGT 16083 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||| | | ||||||||| || |||||||| || Sbjct 16084 CTTCCCCCTTAGGGTTTTCACAAAAATCTGCATTTT 16119 >seq21477 Length=793498 Score = 102 bits (112), Expect = 5e-17 Identities = 80/96 (83%), Gaps = 6/96 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG------GGGTAATCTCG 25955 ||||||||||||||||||||||||| ||| |||||||| |||| ||| ||||| Sbjct 489271 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGATAGTAGGTAGGGACAGTGGGGGTTCTCG 489330 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 || |||| ||||| || ||||||||||||||||||| Sbjct 489331 TTCATCCATTCATACGTGTCACTAATTAGATGACGA 489366 >seq42152 Length=979470 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||| ||||| |||| || || || |||||| || || ||||| |||| Sbjct 315512 TACCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 315571 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || | || || || ||||| || || | || || |||| || Sbjct 315572 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGG 315631 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| || ||| ||||| ||||||||| | || || || | || | Sbjct 315632 GAATGCCTTCCTTATCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCA 315691 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || ||||| || || |||| ||| |||||||| |||||||| Sbjct 315692 CCTCCAGGGTGATAGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 315740 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||| ||||| |||| || || || |||||| || || ||||| |||| Sbjct 315740 TACCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 315799 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || | || || || ||||| || || | || || |||| || Sbjct 315800 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGG 315859 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| || ||| ||||| ||||||||| | || || || | || | Sbjct 315860 GAATGCCTTCCTTATCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCA 315919 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 | || | || || || || || |||| ||| |||||||| |||||||| || Sbjct 315920 CCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 315971 >seq32227 Length=2728 Score = 98.7 bits (108), Expect = 7e-16 Identities = 75/89 (84%), Gaps = 5/89 (6%) Strand=Plus/Minus Query 25908 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCC 25962 |||||||||||||||||||||||||||||||||||||| || ||||||||| |||| Sbjct 2112 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTGATCC 2053 Query 25963 TTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||| || |||| ||||| Sbjct 2052 ATTCGTGCGCGTCGGTAGTTAGCCGACGA 2024 >seq17706 Length=950375 Score = 98.7 bits (108), Expect = 7e-16 Identities = 152/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | ||||||||| |||||||||||||||||| ||||||||| |||| | | Sbjct 545084 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCACC 545143 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | ||| ||||| | || | ||||| || || Sbjct 545144 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 545203 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | |||| |||||| || | || || || Sbjct 545204 CTGGATCTTGGCCTTTACATTTTCTATCATATCCGAGGGTTCAACCTCGAGGGTGATGGT 545263 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||| | | ||||||||||| |||||||| || Sbjct 545264 CTTCCCCATAAGAGTTTTCACGAA-ATCTGCATTTT 545298 >seq44363 Length=166659 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | ||||||||| |||||||||||||||||| ||||||||| |||| | || Sbjct 138078 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 138019 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | ||| |||| ||| | ||||| || || Sbjct 138018 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATAGGA----ATTCCTTCCTTCTC 137963 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | ||||| |||||| || | || || || Sbjct 137962 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCAAGGGTTCAACCTCAAGGGTGATGGT 137903 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTT 38322 | ||| | | |||||||| ||| |||||| ||||| Sbjct 137902 CTGCCCCATAAGGGTTTTCATGAAAATCTGC--GTTTT 137867 >seq38975 Length=485 Score = 96.9 bits (106), Expect = 2e-15 Identities = 168/243 (69%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 38076 CAAATCCAATCATT-ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTG 38134 |||| || | ||| |||||| | | ||| | |||||| || | || |||||||| Sbjct 389 CAAAAACATTTATTGACCACCACGAAGACGGAGCACCAAGTGCAATGTCGATTCCTTTTG 330 Query 38135 AATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCG 38194 ||| |||||||| || | | |||| || || || ||||| ||||| || | || Sbjct 329 AATGTTGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAATCG 270 Query 38195 TTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGT 38254 |||||| |||| |||| || || || || || || ||| || || | | ||| Sbjct 269 TTGTTGGTCGGGTGGGATACCCTCCTTATCTTGGATCTTCGCCTTAACGTTATCAATAGT 210 Query 38255 ATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTG 38314 |||| ||| |||||||||||||| || || || ||||| || || ||||| ||||| Sbjct 209 ATCTGATGATTCTACTTCTAATGTAATGGTCTTTCCAGTCAAAGTCTTGACGAAAATCTG 150 Query 38315 CAT 38317 ||| Sbjct 149 CAT 147 >seq89883 Length=302 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| ||||||||||||| || |||||||| ||||||||||| | ||||||||||| | Sbjct 59 CTCTCTTTTCAAAGTTCTTTGCATCTTTCCCTTACGGTACTTGTACACTATCGGTCTCTC 118 Query 20007 GGTAATATTTAGCCTTA 20023 | | ||||||||| ||| Sbjct 119 GCTGATATTTAGCTTTA 135 >seq83510 Length=277 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | || |||| ||||| ||||| ||| ||| || || || ||||| ||||| Sbjct 233 ACCACCACGCAGCCGCAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 174 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | || | || || | || || |||||||| || || || || || || | || Sbjct 173 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGTCGCTGCTGGTCAGGAGG 114 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||||| |||||| || || ||||||||| | | |||||| | || || Sbjct 113 AATACCTTCCTTGTCCTGGATCTTCGCCTTCACATTTTCAATAGTATCGGAAGGCTCGAC 54 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || | || || || || ||||||| |||||||||||| |||||||| || Sbjct 53 CTCAAGGGTGATGGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATCTT 3 >seq36884 Length=899181 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| ||||||||||| ||| |||||||||||||| ||||||||| |||| | || Sbjct 628426 CAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 628485 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | || ||| | | || | ||||| || | Sbjct 628486 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGACCAGGAGGAATTCCTTCCTTAAC 628545 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || || ||||| | | || ||| |||||| || | || || || Sbjct 628546 CTGGATCTTGGCCTATACATTTTCTATTGTGTCTGAGGGTTCAACCTCGAGGGTGATGGT 628605 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || | |||| ||||||| |||||||| || Sbjct 628606 CTTCCCTGTAAGGGTTATCACGAAAATCTGCATTTT 628641 >seq35270 Length=40606 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||| ||||||||| ||| ||||||| || |||||||| ||||| || |||||||| Sbjct 6999 AAGCTCGTTCCCTTTGCTATGGTTTCACTGGATAGTAGGTAGGGACCGTGGGAATCTCGT 6940 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| || | ||| |||||||||||||||| || Sbjct 6939 TCATCCATTGAAGCGTGTCACTAATTAGATGATGA 6905 >seq97443 Length=343 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | ||||| | || | ||||| || |||||| || ||||||||||| | | Sbjct 251 CCACCACGTAAACGAAGGACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCCGCC 192 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 ||| | | || || | || || || ||||| || | ||||| || || | ||| Sbjct 191 AAAGTCCTCCCATCCTCAAGCTGCTTCCCAGCAAAGATCAAACGTTGCTGGTCTGGTGGG 132 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| |||||| || || ||||||||| | | |||||| || ||||| Sbjct 131 ATCCCTTCCTTGTCCTGTATCTTGGCCTTCACATTATCAATAGTATCAGAGCTCTCAACC 72 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || || || || |||||||| || || || |||||||| Sbjct 71 TCCAAGGTGATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 25 >seq43693 Length=2839110 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/214 (69%), Gaps = 13/214 (6%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | ||||||||| |||||||||||| ||||| ||||||| || Sbjct 374740 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACA-----------TC 374692 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || ||||| || || ||||| || || | ||| ||||| | || || ||||| || || Sbjct 374691 TTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAACTCCTTCCTTATC 374632 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCA-CTTTCAACTTCTAATGTAATAG 38283 | || || ||| ||||| | |||| || | |||||| || | || || | Sbjct 374631 CTGGATATTGGCCTTTACATTTTCTGTTGTAT-TCAAGGGTTCAACCTCAAGGGTGATGG 374573 Query 38284 TTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || | |||||||||||| |||||||| Sbjct 374572 TCTTCCCTGTAAGGGTTTTCACGAAAATCTGCAT 374539 >seq20174 Length=622323 Score = 87.8 bits (96), Expect = 1e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 ||||||||||||||||||||||||||||||| | |||||||||| |||| |||||| | Sbjct 296297 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTATGGTACTTGTTGACTATTGGTCTCATG 296356 Query 20008 GTAATATTTAGCCTTA 20023 | ||||||||| || Sbjct 296357 CCAGTATTTAGCCATA 296372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334394017114472