Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq9420 152 1e-31
seq43468 84.2 4e-11
seq37045 84.2 4e-11
>seq9420
Length=356144
Score = 152 bits (168), Expect = 1e-31
Identities = 388/581 (67%), Gaps = 11/581 (2%)
Strand=Plus/Minus
Query 42287 CGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGA 42346
|||| |||| || |||||| ||||| ||||||||| | ||| ||||||||||||
Sbjct 53453 CGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAAGCTTCCTTCTGGACCGCCGA 53394
Query 42347 GGAGATTGACCTGGCCAAGGACAC--GGCCGGCTGGGAGTCACTGTCTGAGAACGAAA-A 42403
|||| | |||||| ||||||||| ||| |||||| || ||| || || | |
Sbjct 53393 GGAGGTGGACCTGTCCAAGGACATTTGGCA--CTGGGAATCCCTGAAGCCCAAGGAGAGA 53336
Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463
| |||| | | | |||| ||||| || || ||| |||||||| ||||| ||
Sbjct 53335 GATTTTA-TATCCCATGTTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAA 53277
Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523
| ||| | || | |||| || ||| || || ||||| |||| |||||
Sbjct 53276 CTTGGTGGAGCGATTTAGCCAAGAAGTTCAGATGACAGAAGCCCGCTGTTTCTGTGGCTT 53217
Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACAT 42583
||| || |||||||||||| | || ||||| |||| || | |||| |||||
Sbjct 53216 CCAAATTGCCATAGAGAACATACATTCTGAAATGTATAGTTTCCTTATTGACACTTACAT 53157
Query 42584 CCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAA 42643
|||||| || | | || |||| |||| || |||||||| || ||||
Sbjct 53156 AAAAGATCCCAAAGAAAGGGAATTTCTCCTCAATGCCACTGAAACGATGCCTTGTGTCAA 53097
Query 42644 GAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAG 42703
||||||||| || ||||| | ||||||| | | || || || | || || |
Sbjct 53096 GAAGAAGGCAGATTGGGCCTTGCACTGGATTGGGGACAAAGAAGCTACCTATGGTGAACG 53037
Query 42704 GCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTT 42763
| |||| |||| | || | || |||||||| |||| || || || || || ||
Sbjct 53036 TGTTGTAGTCTTTGCTGCAGCGGAAGGCATCTT-TTCT--GGTTATTTTGCATCGATATT 52980
Query 42764 CTGGCTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822
|||||||||| | ||| | |||||| || ||||| || || || ||||| || ||||
Sbjct 52979 CTGGCTCAAGAAACGAGGACT-GATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCA 52921
Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
| || ||||| | || | || ||||| ||||| |||||
Sbjct 52920 GAGATGAGGGTTTACACTGTGATTTTGCTTGCCTGATGTTC 52880
>seq43468
Length=1795776
Score = 84.2 bits (92), Expect = 4e-11
Identities = 95/125 (76%), Gaps = 2/125 (2%)
Strand=Plus/Plus
Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765
|||| |||||| | || || || || || |||||||| || | || || | || ||||
Sbjct 1441959 TGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGATCTTTTGCTGCTATATTCT 1442018
Query 42766 GGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824
|||| ||| ||| |||| | ||||| |||||||| || || || ||||||||||||||
Sbjct 1442019 GGCTAAAGAAGAGAGGTCTT-ATGCCAGGACTCACTTTTTCCAATGAACTCATCAGCAGA 1442077
Query 42825 GACGA 42829
|| ||
Sbjct 1442078 GATGA 1442082
>seq37045
Length=3135053
Score = 84.2 bits (92), Expect = 4e-11
Identities = 95/125 (76%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767
||||||||| | || || || ||||||||||| || || | || || || || ||||||
Sbjct 1579345 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGG 1579286
Query 42768 CTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826
|||||| | ||| | |||||| || ||||| || || || ||||| |||||||| ||
Sbjct 1579285 CTCAAGAAACGAGGACT-GATGCCTGGCCTCACATTTTCCAATGAACTTATCAGCAGAGA 1579227
Query 42827 CGAGG 42831
||||
Sbjct 1579226 TGAGG 1579222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 942739583829120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |